| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004047 |
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| Symbol | |
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| ID | 8557786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2706037 |
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| End bp | 2707374 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407148 |
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| Product | C4-dicarboxylate transport transcriptional regulatory protein |
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| Protein accession | YP_003286672 |
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| Protein GI | 262394818 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.114732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTCAGG TGTTTTTTAT TGATGATGAA GCCGATCTTA GACTGGCAAT AGAACAAACG
TTTGAATTGG CAGATATCGA TGCCACATTC TTTCCAGACG CTGAATCTGC CTTACTCGCC
ATTAAGCAGG GAGCCGAGCC AGGTGTGGTG ATTACCGATA TTTGCTTACC CGGTATTTCA
GGGATGGATT TACTGAATAC CCTTGTGCGC AAAGACACCC ATCTTCCCGT GATTATGATT
ACTGGTCATG GCGATATCTC AATGGCGGTT AATGCGTTAC ACCAAGGAGC GTATGATTTT
ATCGAAAAGC CATTCCCACC TGAGCACCTA GTTGAAACCG TCAAGCGCGC CATTGAGAAG
CGCCAATTAA CGGTTGAAAA CGAGAAGTTA CGCCTGTCTC TCAAGGCAAG TAAAACGCTC
GGACCTCGTG TTATCGGAGA AACGTCTAGC ATTCAAATGT TACGCGAAAC CATTGCTCAC
ATCGCCGATA CTGATGCAGA TATCTTATTG TTTGGCGAAA CTGGTACAGG TAAAGAGTTA
ATCGCCCGTT CTTTGCATGA GCAAAGCTCT CGACGGAACC AAAACTTTGT CGCAGTAAAT
TGTGGTGCAG TACCAGAGAA TTTGATTGAG AGCGAACTCT ACGGGCATGA AAAAGGCGCA
TTTACTGGCG CAGAAAGCCG CCGTATCGGT AAGTTTGAAT TTGCTCAAGG CGGTACACTT
TTCTTGGATG AAATCGAGTC AATGCCAATC CAAGCCCAAA TCCGTTTACT GAGAGTACTG
CAAGAGCGTG TGATTGAGCG TGTCGGCTCG AATGAACTCT TGCCCTTAGA TATTCGAGTG
ATTGCCGCCA CCAAAGTCGA TTTGAAACGC GCTGCTGAAG AGGGAACCTT TCGCCAAGAT
CTTTACTATC GACTGAATGT GGTTACCTTA GATCTCCCGC CACTGCGTGA ACGGAAAGAA
GACATCCCTG CCCTCTTCCA TCACTTCCTA TTGGTAGCGG CTTCACGTTA TGGTAAAAGC
TCTCCTAGCT TGTCATCCCA CGACCTCGCC CAACTGATGA ACCATGACTG GCCAGGCAAT
GTTCGCGAGC TAAGAAATGC AGCAGAGCGT TTCGTGCTAT TGGGTAAATT AATTCAGTTA
GGAGAATCGA CTCCGGTTGC CAAGCCTTCT TCAAGTCTTG CAGAACAAGT AGCAGAGTTC
GAGAGAGCTG CCATTGAAGG TGCATTACTA GAAAATAACG GCAGCATTAA ACAGACAATG
GCGCAATTGA ATGTGCCTCG AAAAACTCTG TATGACAAAA TGCAACGCTA TCAAATAGAT
AAAGAGCTCT ATAAATAA
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| Protein sequence | MCQVFFIDDE ADLRLAIEQT FELADIDATF FPDAESALLA IKQGAEPGVV ITDICLPGIS
GMDLLNTLVR KDTHLPVIMI TGHGDISMAV NALHQGAYDF IEKPFPPEHL VETVKRAIEK
RQLTVENEKL RLSLKASKTL GPRVIGETSS IQMLRETIAH IADTDADILL FGETGTGKEL
IARSLHEQSS RRNQNFVAVN CGAVPENLIE SELYGHEKGA FTGAESRRIG KFEFAQGGTL
FLDEIESMPI QAQIRLLRVL QERVIERVGS NELLPLDIRV IAATKVDLKR AAEEGTFRQD
LYYRLNVVTL DLPPLRERKE DIPALFHHFL LVAASRYGKS SPSLSSHDLA QLMNHDWPGN
VRELRNAAER FVLLGKLIQL GESTPVAKPS SSLAEQVAEF ERAAIEGALL ENNGSIKQTM
AQLNVPRKTL YDKMQRYQID KELYK
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