Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004046 |
Symbol | |
ID | 8557785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2704227 |
End bp | 2706032 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407147 |
Product | signal transduction histidine kinase regulating C4-dicarboxylate transport system |
Protein accession | YP_003286671 |
Protein GI | 262394817 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0733416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAAA AAAACCGGAT TCTGCTGACT TTTTTTGCCT TCTATTTCCT TTGCGCAATC ATAGGTGGTC ATTGGGTTTG GCAGACTAGT TATCAATCAT TGCTTGATAA ACACCAGTCC CAACTTGAGC AATTTTCTAG TCATATTAAA AACAAACTCG ATAAATACGC CCATATCCCT AACCTTCTGG CCAAAGATGA CCCTCTCCAT CAAGCGTTAC TGCATCCAAA TAACAGTGCC CAACTGGAAC TCACCAATCG GTATTTAGAA TCCGTTAATG ACGTGATTGA AGCGGCAGAT ACCTATTTAA TCGATCAATG GGGTACGACG GTCGCGGCCA GCAACTGGCG TAAAGAGCGA TCTTTTCTTG GACGAAATTT TGCGTTCCGC CCTTATTTCA AACAAGCAAT CGTTGGGGAA CGAAGCCAAT ACTACGCGCT GGGTTCGACT TCGGGTAAGC GTGGCTACTA CTATTCTTAT CCGATCATAT ACGCGGGCGG CGTCCTTGGT GTGGTCGTGG TTAAGATGGA CTTGAGTAAG ATAGAAGACA ACTGGCAGCA GCCAAATAGT GTGTTCGTCG CGAGCGATCC GCACGGGATT GTTTTCATGA GCAGCCGAAG TGATTGGCTA CTCAAAAGCT TACAACCACT GACTGAGAAT GAAAGAAAAC AAGTTTGGGC AAGCCGACAA TACCTTGATG AGCCAATTGA AACTCTAGGA TTGGTGGGCA ATGTGGAGGA AACGCATTCT GAGCTTAAAC AAGGTTACCC ATATAACAAA GGGACCTTGG TGGTCTCTTC GTTGCCCCTA CCAGAGCTCA AGCTGACCAT CCGTGTACTA TCTCCCAAGC AGTCTATCGT CTGGCTCACT ATGGGTTACA TTTTTGTACT TACTCTTGCA TTCACCGTAT TGTTTTTAAT TGGCCAGCTC ATCTATCACC GTCAACAACG CCACTTACAA CTTGAGAGAA TTCAACAAGA GGCCAATCAA AAACTTGAAT ATCAAGTCAT GGCTCGCACC GCAGAATTGC AAGCAGAAAT CGCCCAGAGA ATAGAAACCG AACAAACACT TCGCCTAACG CAAGACGAAC TCGTTCAAGC TGCGAAACTA GCAGTATTAG GGCAAATGTC AGCCAGTATC AGTCATGAAC TGAATAATCC ACTTGCGGCC ATTCGCAGCT TTGCTGAAAA CGGCAAGCTG TTCCTCCAAA AAGAAAAATA TGAGCGAGTG GAAGATAATC TAACTCGTAT CTCAGCCCTC ACTGATCGTA TGGCAAACAT CAGTCAGCAG CTTCGTTCTT TCGCTAAAAA AACCAGTGGA AACGAGCTGG CTCAATCTCG TTTGTTTCCA GTAATTGCCT CAGTCAAAGA GCTGATGAAA CCCGCACTTA AATCTGCACG TGTCACGCTA GAAACTCAGG TACCAGAGCA CGATGTTGAA GTTCAGATCA ATATCATTCA ACTTGAACAA GTGTTGGTTA ATTTACTGAC CAATGCGATA GAGGCTCTCA AAGAGCAACA AGACAAACAA GTACAGTTAT CCATAGAGCA AGACGAGCAT GCCGGTTTGG TTTGGATTCA TGTAGATGAC AATGGTCCAG GGCTTGGAGA TTTCTCACTT TCGGACTTAT GTGAGCCTTT CCTAACTACC AAACAAAATG GGTTAGGTTT AGGACTCTCT ATCTCGCAAC AAATCTTAGC CAGTATGAAC GGAAGATTAT GTGCCCAAAA CCGAGAACAA GGCGGAGCTC GGTTTTCATT GTGTTTACCT ATCGCTCCTA ACAACACAGA AAAATCAAAA GGATGA
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Protein sequence | MSQKNRILLT FFAFYFLCAI IGGHWVWQTS YQSLLDKHQS QLEQFSSHIK NKLDKYAHIP NLLAKDDPLH QALLHPNNSA QLELTNRYLE SVNDVIEAAD TYLIDQWGTT VAASNWRKER SFLGRNFAFR PYFKQAIVGE RSQYYALGST SGKRGYYYSY PIIYAGGVLG VVVVKMDLSK IEDNWQQPNS VFVASDPHGI VFMSSRSDWL LKSLQPLTEN ERKQVWASRQ YLDEPIETLG LVGNVEETHS ELKQGYPYNK GTLVVSSLPL PELKLTIRVL SPKQSIVWLT MGYIFVLTLA FTVLFLIGQL IYHRQQRHLQ LERIQQEANQ KLEYQVMART AELQAEIAQR IETEQTLRLT QDELVQAAKL AVLGQMSASI SHELNNPLAA IRSFAENGKL FLQKEKYERV EDNLTRISAL TDRMANISQQ LRSFAKKTSG NELAQSRLFP VIASVKELMK PALKSARVTL ETQVPEHDVE VQINIIQLEQ VLVNLLTNAI EALKEQQDKQ VQLSIEQDEH AGLVWIHVDD NGPGLGDFSL SDLCEPFLTT KQNGLGLGLS ISQQILASMN GRLCAQNREQ GGARFSLCLP IAPNNTEKSK G
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