| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004046 |
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| Symbol | |
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| ID | 8557785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2704227 |
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| End bp | 2706032 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407147 |
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| Product | signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| Protein accession | YP_003286671 |
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| Protein GI | 262394817 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0733416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAA AAAACCGGAT TCTGCTGACT TTTTTTGCCT TCTATTTCCT TTGCGCAATC
ATAGGTGGTC ATTGGGTTTG GCAGACTAGT TATCAATCAT TGCTTGATAA ACACCAGTCC
CAACTTGAGC AATTTTCTAG TCATATTAAA AACAAACTCG ATAAATACGC CCATATCCCT
AACCTTCTGG CCAAAGATGA CCCTCTCCAT CAAGCGTTAC TGCATCCAAA TAACAGTGCC
CAACTGGAAC TCACCAATCG GTATTTAGAA TCCGTTAATG ACGTGATTGA AGCGGCAGAT
ACCTATTTAA TCGATCAATG GGGTACGACG GTCGCGGCCA GCAACTGGCG TAAAGAGCGA
TCTTTTCTTG GACGAAATTT TGCGTTCCGC CCTTATTTCA AACAAGCAAT CGTTGGGGAA
CGAAGCCAAT ACTACGCGCT GGGTTCGACT TCGGGTAAGC GTGGCTACTA CTATTCTTAT
CCGATCATAT ACGCGGGCGG CGTCCTTGGT GTGGTCGTGG TTAAGATGGA CTTGAGTAAG
ATAGAAGACA ACTGGCAGCA GCCAAATAGT GTGTTCGTCG CGAGCGATCC GCACGGGATT
GTTTTCATGA GCAGCCGAAG TGATTGGCTA CTCAAAAGCT TACAACCACT GACTGAGAAT
GAAAGAAAAC AAGTTTGGGC AAGCCGACAA TACCTTGATG AGCCAATTGA AACTCTAGGA
TTGGTGGGCA ATGTGGAGGA AACGCATTCT GAGCTTAAAC AAGGTTACCC ATATAACAAA
GGGACCTTGG TGGTCTCTTC GTTGCCCCTA CCAGAGCTCA AGCTGACCAT CCGTGTACTA
TCTCCCAAGC AGTCTATCGT CTGGCTCACT ATGGGTTACA TTTTTGTACT TACTCTTGCA
TTCACCGTAT TGTTTTTAAT TGGCCAGCTC ATCTATCACC GTCAACAACG CCACTTACAA
CTTGAGAGAA TTCAACAAGA GGCCAATCAA AAACTTGAAT ATCAAGTCAT GGCTCGCACC
GCAGAATTGC AAGCAGAAAT CGCCCAGAGA ATAGAAACCG AACAAACACT TCGCCTAACG
CAAGACGAAC TCGTTCAAGC TGCGAAACTA GCAGTATTAG GGCAAATGTC AGCCAGTATC
AGTCATGAAC TGAATAATCC ACTTGCGGCC ATTCGCAGCT TTGCTGAAAA CGGCAAGCTG
TTCCTCCAAA AAGAAAAATA TGAGCGAGTG GAAGATAATC TAACTCGTAT CTCAGCCCTC
ACTGATCGTA TGGCAAACAT CAGTCAGCAG CTTCGTTCTT TCGCTAAAAA AACCAGTGGA
AACGAGCTGG CTCAATCTCG TTTGTTTCCA GTAATTGCCT CAGTCAAAGA GCTGATGAAA
CCCGCACTTA AATCTGCACG TGTCACGCTA GAAACTCAGG TACCAGAGCA CGATGTTGAA
GTTCAGATCA ATATCATTCA ACTTGAACAA GTGTTGGTTA ATTTACTGAC CAATGCGATA
GAGGCTCTCA AAGAGCAACA AGACAAACAA GTACAGTTAT CCATAGAGCA AGACGAGCAT
GCCGGTTTGG TTTGGATTCA TGTAGATGAC AATGGTCCAG GGCTTGGAGA TTTCTCACTT
TCGGACTTAT GTGAGCCTTT CCTAACTACC AAACAAAATG GGTTAGGTTT AGGACTCTCT
ATCTCGCAAC AAATCTTAGC CAGTATGAAC GGAAGATTAT GTGCCCAAAA CCGAGAACAA
GGCGGAGCTC GGTTTTCATT GTGTTTACCT ATCGCTCCTA ACAACACAGA AAAATCAAAA
GGATGA
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| Protein sequence | MSQKNRILLT FFAFYFLCAI IGGHWVWQTS YQSLLDKHQS QLEQFSSHIK NKLDKYAHIP
NLLAKDDPLH QALLHPNNSA QLELTNRYLE SVNDVIEAAD TYLIDQWGTT VAASNWRKER
SFLGRNFAFR PYFKQAIVGE RSQYYALGST SGKRGYYYSY PIIYAGGVLG VVVVKMDLSK
IEDNWQQPNS VFVASDPHGI VFMSSRSDWL LKSLQPLTEN ERKQVWASRQ YLDEPIETLG
LVGNVEETHS ELKQGYPYNK GTLVVSSLPL PELKLTIRVL SPKQSIVWLT MGYIFVLTLA
FTVLFLIGQL IYHRQQRHLQ LERIQQEANQ KLEYQVMART AELQAEIAQR IETEQTLRLT
QDELVQAAKL AVLGQMSASI SHELNNPLAA IRSFAENGKL FLQKEKYERV EDNLTRISAL
TDRMANISQQ LRSFAKKTSG NELAQSRLFP VIASVKELMK PALKSARVTL ETQVPEHDVE
VQINIIQLEQ VLVNLLTNAI EALKEQQDKQ VQLSIEQDEH AGLVWIHVDD NGPGLGDFSL
SDLCEPFLTT KQNGLGLGLS ISQQILASMN GRLCAQNREQ GGARFSLCLP IAPNNTEKSK
G
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