Gene VEA_004039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004039 
Symbol 
ID8557778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2694794 
End bp2695087 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content42% 
IMG OID646407140 
ProductDNA uptake protein 
Protein accessionYP_003286664 
Protein GI262394810 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000258752 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAATA TGAAATGGAT TTTGACATTG TGCTTATTTG TTTTTGCGCC TTTTAGCATG 
GCTGCGGATT CAGCCACTGA CAAATATGAA GGAATTGAAA TTACCGTAAA TATCAACACG
GCCTCTGCTG AAGAAATAGC GACCATGTTG AAAGGTATTG GTGAGAAGAA AGCGCAGAGT
ATCGTGGACT ACCGCGAGGA GCATGGCCCT TTTAAAACAG CAGCAGATTT GAAGAGCGTA
AAAGGCATTG GTGAAGCGAC AGTTAAGAAA AACGAAGACC GCATTTTACT GTAG
 
Protein sequence
MFNMKWILTL CLFVFAPFSM AADSATDKYE GIEITVNINT ASAEEIATML KGIGEKKAQS 
IVDYREEHGP FKTAADLKSV KGIGEATVKK NEDRILL