Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004039 |
Symbol | |
ID | 8557778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2694794 |
End bp | 2695087 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646407140 |
Product | DNA uptake protein |
Protein accession | YP_003286664 |
Protein GI | 262394810 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region [TIGR01259] comEA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000258752 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAATA TGAAATGGAT TTTGACATTG TGCTTATTTG TTTTTGCGCC TTTTAGCATG GCTGCGGATT CAGCCACTGA CAAATATGAA GGAATTGAAA TTACCGTAAA TATCAACACG GCCTCTGCTG AAGAAATAGC GACCATGTTG AAAGGTATTG GTGAGAAGAA AGCGCAGAGT ATCGTGGACT ACCGCGAGGA GCATGGCCCT TTTAAAACAG CAGCAGATTT GAAGAGCGTA AAAGGCATTG GTGAAGCGAC AGTTAAGAAA AACGAAGACC GCATTTTACT GTAG
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Protein sequence | MFNMKWILTL CLFVFAPFSM AADSATDKYE GIEITVNINT ASAEEIATML KGIGEKKAQS IVDYREEHGP FKTAADLKSV KGIGEATVKK NEDRILL
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