| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004033 |
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| Symbol | |
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| ID | 8557772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2688767 |
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| End bp | 2690074 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407134 |
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| Product | menaquinone-specific isochorismate synthase |
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| Protein accession | YP_003286658 |
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| Protein GI | 262394804 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCACAGT TCCATCAAGC CGTAAAGAGA ATTATCGAGC GAGTTCAGCA AGCGGAAGGC
AATCAAACAC GTCTGGTCGA GCCCCTGAGC GAGAAACCTA ATTTCTCATT TATTGATTGG
CTTGATGCAC AACCACTTTT CCCTAAATTC TACTGGCAGT CCCGCGATAC TCGTGAAGAG
GTCGTTGCAC TAGGGCAATT ACACGCTTTT GTTGAGCCAG GCCCTGCTTA TACCATTCTA
GGTGAAGGGC AACGAGTCTG GGGCGGACGC TCTTTTGACG GCCAGCATGA GAAGAATCGT
CGCTGTATGC CTTCTTTCTT CTTTTTGCCT CAAATTGAGT TAATTCGTTT TGACCAACAA
TGGTCTCTCG CAGTTAATAT TTCAGAAGAC AAAGCGCGAA CCCTAGCAGG ACTGCATAAA
CTGGTTTGTG AGGTCGCGAC CTTAGCTCCG ATTTCTTCTC ACATCCGCTC TATTGTTCAT
ACGCCAAGTC AGCCTCAATG GAATGAGTTA GTTCATAAAG TTCTGACTGG TATAAAGAAT
GATGATTTTA AGAAAGTGGT ATTGGCGCGT CGCTCTACCG TGCAGCTTGA TAACACATTA
AGTGCTGCAC AATTGCTGAA AGCGAGTTAC TTAAATAACC ATCATAGTTT CCATTTCATG
CTGAGCTTAG ACAGCAAACA CAGCTTTATG GGTTCTACGC CAGAACGTTT GTATTCTCGC
GTAGGGCACG AACTTCATAC CGAAGCGTTA GCAGGCACGA TTGGTCGAGG GGACAACGCC
ACTCACGATA TGGAGTTGGC GAATTGGTTA TCCCAAGATG AAAAGAACCT CAATGAAAAC
CAATATGTAG TTGATGACAT TATTGATCGC CTATCACCGC ATTCCGAAGC GGTTGAAGTG
GAGGCCGAGG CAAGTTTGGT TAGGCTACGA AAAGTGCAAC ACCTCAAGCG AAATATTCAC
GCGAGCCTAA AGACGGGAAT AAACGGTGTT CAGTTGTTAT CGGCGCTTCA GCCGACGGCG
GCGGTTGCTG GCTTACCTCG ACAAGAATCC ATGCAGTTTA TTCTTGATAA TGAGCCCTTT
GCACGCGGCT GGTACGCGGG GTCAATGGGG TACATAAGCC ATGAACGAGC AGAGTTTTGT
GTCGCGATCA GAAGCGCGCT TGTGCTCGGT GACCAAGTAC AACTGTTTGC GGGCGCAGGT
ATTGTGCCAG GCTCTGTGGC AGAGCATGAG TGGGCGGAAC TTGATAAGAA AATGTCGACG
TTACTTACGC TGATTTCTGA TCACCCCCCG TTGGGAGTCG CATCATGA
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| Protein sequence | MSQFHQAVKR IIERVQQAEG NQTRLVEPLS EKPNFSFIDW LDAQPLFPKF YWQSRDTREE
VVALGQLHAF VEPGPAYTIL GEGQRVWGGR SFDGQHEKNR RCMPSFFFLP QIELIRFDQQ
WSLAVNISED KARTLAGLHK LVCEVATLAP ISSHIRSIVH TPSQPQWNEL VHKVLTGIKN
DDFKKVVLAR RSTVQLDNTL SAAQLLKASY LNNHHSFHFM LSLDSKHSFM GSTPERLYSR
VGHELHTEAL AGTIGRGDNA THDMELANWL SQDEKNLNEN QYVVDDIIDR LSPHSEAVEV
EAEASLVRLR KVQHLKRNIH ASLKTGINGV QLLSALQPTA AVAGLPRQES MQFILDNEPF
ARGWYAGSMG YISHERAEFC VAIRSALVLG DQVQLFAGAG IVPGSVAEHE WAELDKKMST
LLTLISDHPP LGVAS
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