| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004032 |
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| Symbol | |
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| ID | 8557771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2687052 |
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| End bp | 2688770 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407133 |
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| Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase |
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| Protein accession | YP_003286657 |
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| Protein GI | 262394803 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCATG ACCAAGCGGT GCTCAATCGA ATTTGGTCAG AAACCATATT GATTGAGCTT
CAGCGATTTG GCGTTAAGCA TGTTTGTATC GCTCCTGGCT CTCGTTCTAC TCCTTTAACT
TTAGAGGTGG CAGAACGGTC CAATGTTTCT ATTCATACTC ACTTTGATGA GCGTGGTCTC
GGCTTTATGG CTCTTGGTTT AGCGAAAGCT ACTCAAGAGC CAGTGGCAAT CATCGTTACC
TCTGGTACGG CAGTGGCGAA CTTATTACCA GCCGTTGCGG AGGCTAGGCT TACTGGTGAA
AAGCTGGTGC TGCTCACTGC GGATCGTCCG ATGGAGCTCG TTGGCTGTGG CGCAAACCAA
GCGATTAACC AGTTGGGTAT TTTTTCACAT CATGTCTCGG CCAGCTTGAA TTTACCAAGC
CCAACTTTAA CAACATCGCT TAATTGGTTG CTGACCTCTG TTGACGAAGT GATGTTTACT
CAGCAGCTGC AAGGCAGTGC TGTTCATATT AACTGTGCAT TTCCAGAACC TTTGTATTCC
AATGGTGCAA AAGCGGATTA TCAAACCTAC TTAGACTCGG TAGCCGGATG GCGAAAAGGA
AGTGGTAGTT ATACCCAGCG TTTTAGCCAC TTGTCACAGG CGAAAATCCC GTCTTGTGCG
GATAAAAAAG GCTTGGTTGT GATTGGCAGC TTACCGCTTG AACAAGCGAA GTCGGCGCAG
GCATTTGCAC AAAAGATGGG ATGGCCAGTA CTTGCAGACC CGCAAAGTGG TCTCAGTTCG
GATTGGGCGC ATTACGATGT CTGGCTTCAA CTTCCCGAGT TCGCAAACGA GCTTGAATCT
TGTGAACTTA TTATCCAATT TGGTAGCCGA ATCATCTCCA AACGTTTGAA CCAGTGGATT
GATAAACAAG TTTCGCAGAG TCAACAAGAC AAAGACGTTC AATACTGGTA TATCTCGCCG
CGTATGGACC GTAATAACCA AAATCATCTG GCGCAAATGC ACTGGGTTGA GCTTCCTCAA
ACTTGGATTT CTCGCATTAG CTTTGAGAAG CCAATATTTG CTGGGTGGGC TGATAGGTTA
GCGAATGGAG TTAAGCGAGT TCATCAACGT ATCGAAGAAG CTTTCCTATC TGATTCAGCG
TCTGCCATTG ACGAAATTGC GTTGGCAGCA GACATCAACG AGCGCACTAA AAACGCTGAT
GTCTTTTTGG GTAACAGTTT GTTTGTTCGA CTTGTCGATA TGTACGGCAA ACTTGATGAT
GTAGAAGTGT TCACTAACCG AGGCGCGTCA GGAATTGACG GTTTGTTTGC TACCGCATCT
GGTGTGCAGC GAGCAAGAGG TAATCCGTTA CTGATGTATA TTGGTGACAC ATCAGCACTG
TATGATCTCA ATTCACTAGC GCTGTTTTCT CACAATAAAC TGCCGACGGT ACTTGTGGTC
ACAAACAATG ATGGTGGCGC AATTTTCGAT ATGTTACCGG TGCCTCAGGA GCATCGCACT
GCGTACTACC AAATGCCCCA CGGTTATCAG TTTGAACATG CAGCCAAACA GTTTGGTTTA
AAGTATGAGA AGCCAACTAC GTTAGAAATG TATCAAGCAA TGGTTGCCGA GCACCTGTCG
AGCGGCCAAG GCACACTGCT GGTGGAAGTT CAAACCCCAC CAAGCCAAGC CGCAGAGTTG
ATAAAGGCAT TTAATAAGAG CCTGCATGCT TCACTCTGA
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| Protein sequence | MNHDQAVLNR IWSETILIEL QRFGVKHVCI APGSRSTPLT LEVAERSNVS IHTHFDERGL
GFMALGLAKA TQEPVAIIVT SGTAVANLLP AVAEARLTGE KLVLLTADRP MELVGCGANQ
AINQLGIFSH HVSASLNLPS PTLTTSLNWL LTSVDEVMFT QQLQGSAVHI NCAFPEPLYS
NGAKADYQTY LDSVAGWRKG SGSYTQRFSH LSQAKIPSCA DKKGLVVIGS LPLEQAKSAQ
AFAQKMGWPV LADPQSGLSS DWAHYDVWLQ LPEFANELES CELIIQFGSR IISKRLNQWI
DKQVSQSQQD KDVQYWYISP RMDRNNQNHL AQMHWVELPQ TWISRISFEK PIFAGWADRL
ANGVKRVHQR IEEAFLSDSA SAIDEIALAA DINERTKNAD VFLGNSLFVR LVDMYGKLDD
VEVFTNRGAS GIDGLFATAS GVQRARGNPL LMYIGDTSAL YDLNSLALFS HNKLPTVLVV
TNNDGGAIFD MLPVPQEHRT AYYQMPHGYQ FEHAAKQFGL KYEKPTTLEM YQAMVAEHLS
SGQGTLLVEV QTPPSQAAEL IKAFNKSLHA SL
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