Gene VEA_004024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004024 
Symbol 
ID8557763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp2679042 
End bp2679632 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content43% 
IMG OID646407125 
Producttranscriptional regulator 
Protein accessionYP_003286649 
Protein GI262394795 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000690924 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCA GAAACGATCA CACCAGAGAA GAGCTAGTGA ATTTGACTTT AACAACAGTC 
AAAAACTTTT TAGATGAGAA TTCTTACCAC GAACTCAGTC TTCGTAAAAT CGCTAACATG 
ATTGGTTACG TGCCAAGCAC ATTAGTCAAC ATTTTTGGCA ACTATAACCT GTTACTTTTA 
CACGTAGTCG CGCAAACTTT AGACGAACTC TCCCAAGAAG CACTGAAGGC GACCAATAGC 
AGTAAAGACG CTCATCAAGC TCTATTTGAA CTGGCTTATT GCTACCACGA TTTCGCTCAA 
AAGCACCCTT ACCGTTGGCA GTTAGTGTTC GAGCACAACA TGAATGGTGC AGAGCTTCCA 
GAATGGCATG CCAAACGTAT CGACGGGATG ACAGGAATGT TGGAGTCACT ATTGGCTCAA 
ATCGCACCAC ATCGTACCGA GTCCGAAGTG ATTCAAGCGA GTCGAGTGCT TTGGTCTGGC 
GTACACGGTA TTACTTTACT CAGTGTTGAT GATAAATTTT TCTCTAGTGA ACCCATTGAT 
GGTAAAGAAT TAATCAGTAA CCTGCTTTCT AACTACCTCA CAAACTGGTA A
 
Protein sequence
MARRNDHTRE ELVNLTLTTV KNFLDENSYH ELSLRKIANM IGYVPSTLVN IFGNYNLLLL 
HVVAQTLDEL SQEALKATNS SKDAHQALFE LAYCYHDFAQ KHPYRWQLVF EHNMNGAELP 
EWHAKRIDGM TGMLESLLAQ IAPHRTESEV IQASRVLWSG VHGITLLSVD DKFFSSEPID 
GKELISNLLS NYLTNW