| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004003 |
|---|
| Symbol | |
|---|
| ID | 8557739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2650995 |
|---|
| End bp | 2651345 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 646407101 |
|---|
| Product | HIT family hydrolase |
|---|
| Protein accession | YP_003286628 |
|---|
| Protein GI | 262394774 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG AAACGATCTT TAGTAAAATT ATTCGTAAGG AAATCCCTGC CGATATTCTT
TATCAAGATG AGTTGGTGAC TGCGTTTCGC GATATTAACC CGCGCACACC GAGCCATATT
CTCATTATTC CGAATAAATT GATCCCAACA ACGAATGATG TTGAAGCTGA AGATGAAGCA
ATGATGGGGC GTTTGTTCAC TGTTGCTAAA AAACTGGCGA AAGAGGAAGG CATTGCGGAA
GACGGCTATC GCCTGATCGT TAATTGTAAC CCGCACGGTG GCCAAGAGGT TTACCATATT
CACATGCACC TATTAGGCGG TCGTCCTCTA GGTCCAATGG TATTGAGCTA A
|
|---|
| Protein sequence | MAEETIFSKI IRKEIPADIL YQDELVTAFR DINPRTPSHI LIIPNKLIPT TNDVEAEDEA
MMGRLFTVAK KLAKEEGIAE DGYRLIVNCN PHGGQEVYHI HMHLLGGRPL GPMVLS
|
|---|
| |