| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004001 |
|---|
| Symbol | |
|---|
| ID | 8557737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2649134 |
|---|
| End bp | 2649526 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 646407099 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003286626 |
|---|
| Protein GI | 262394772 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5633] Predicted periplasmic lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAT GGCTTATTTG TTTAGCAATG GCTATTGGTT TAGTTGGATG CGCCGAAAAC
ACGGCTGGTA TTCGAATTGA TGGTCAAACG CAAAAAGTAT TTTTTAATGA TAACGTTTTG
GGTAGTCGCT TATTAGTTGA CAACATCACC ACCACTTACG TTGATGATCG TCCACGTGGA
GTGGTGCAAC TAAGCAGTAA CTATAAAGGT GACCAGCACA TTCTTTACCG CTTCTATTGG
TATGACAATA ATGGTTTAGA AGTGAATACC AAGCCTGGCC CATGGCGCAA AATGATTGTG
CGAGGGTTTG AGCAAGTCAC GTTATCTGAA GTTACTGTGA ATCCAAATGG CACCAAATTC
CGTGTTCAAA TTAGAGAAGC ACAAGACAAT TAA
|
|---|
| Protein sequence | MKAWLICLAM AIGLVGCAEN TAGIRIDGQT QKVFFNDNVL GSRLLVDNIT TTYVDDRPRG
VVQLSSNYKG DQHILYRFYW YDNNGLEVNT KPGPWRKMIV RGFEQVTLSE VTVNPNGTKF
RVQIREAQDN
|
|---|
| |