| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003999 |
|---|
| Symbol | |
|---|
| ID | 8557735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2647571 |
|---|
| End bp | 2648452 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646407097 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003286624 |
|---|
| Protein GI | 262394770 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
|---|
| TIGRFAM ID | [TIGR02721] thiamine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATGGT TTTCTTGGCA ACAAGCAAAA CAGTTAGATC CGAGTCTTAA TGCTCTCGAT
GGCTTCTTTA CTGAGCCTCC GGTAAAAGTT CAAACCGTTA CCGGGGGGCT AACCAACCGT
TGTTGGCGGT TGGAATCCTC TCAAGGCCTT GTATACATCT GGCGACCGAC CAGTAATGTT
TGCAAGGCTT TTTCAATTTC TCGCCACAAT GAATATCAAG TTCTGAATGC TATCTCTTCA
TTAGAAATTG GTCCTAAGCC AGTGTTTATC CACGAGCAAG GTTTACTGGT GGAATGGATC
GAAGGGCAAG CACTTTCGGA TGTAGGGCTA CCAGTAAGAG ATTTATTATC CATTGCGGCG
ACCATTCATC AGCACCCGAT CAGCGCGCTC CCTTTGGTTC CATTTTCTTA TATTTCTCGC
ATCGATCATT ATTGGCTTGA GCTTGATGGT CAGTATGCGG ATACGGAATT TGAGGCTCTA
TACATGAAGT GGCGCACGGA ACCGAGTGTA GCGCCGGTTC CACTAGCTCT TTGTCACTTT
GACCTGGGGT GTTACAACCT CGTTCGGGGA GATAGTGGAG TGAAAGTCAT TGATTGGGAG
TATGCTGGTA TTGCTGACCC TAGGCTTGAT TTGACCTTGA CTATTCAAGT CGCGGATGCG
CCTGTGGAAG AGGCAGTGAA ACAGTATTGC CAAATTCGAG GTATCGACGA TACGTCTCTT
TGGTTAAGTG GTGTACAGGC GTGGCAGCCA AGAACCCTAG TGATGGCGAT GCTTTGGTAT
CTACTGGCCT ATAAATTGTG GGGAGATGAA CAATACTTAA ACAGTGCGCA TGAGTTGAAA
GGCTCATTGT GTATGGAAGA TCACTGTTTT GAGAACTCGT GA
|
|---|
| Protein sequence | MAWFSWQQAK QLDPSLNALD GFFTEPPVKV QTVTGGLTNR CWRLESSQGL VYIWRPTSNV
CKAFSISRHN EYQVLNAISS LEIGPKPVFI HEQGLLVEWI EGQALSDVGL PVRDLLSIAA
TIHQHPISAL PLVPFSYISR IDHYWLELDG QYADTEFEAL YMKWRTEPSV APVPLALCHF
DLGCYNLVRG DSGVKVIDWE YAGIADPRLD LTLTIQVADA PVEEAVKQYC QIRGIDDTSL
WLSGVQAWQP RTLVMAMLWY LLAYKLWGDE QYLNSAHELK GSLCMEDHCF ENS
|
|---|
| |