Gene VEA_003997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003997 
Symbol 
ID8557733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2645127 
End bp2646416 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content48% 
IMG OID646407095 
ProductNADH dehydrogenase 
Protein accessionYP_003286622 
Protein GI262394768 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACACGCA TTATCGTTGT AGGCGGCGGT GCTGGTGGTC TTGAGTTGGC AACTAAGCTT 
GGCCGAACTC TAGGTCGCAA GAACCGTGCG CAAATTACGC TAGTAGATCG TAAAGCGAGC
CACTTGTGGA AGCCATTATT GCATGAAGTT GCAACTGGCT CTTTGGACGA AGGGGTGGAT
GCTCTGAGTT ATCGAGCTCA TGCAAAAAAC CACAGCTTCG ACTTCCAAAT GGGTAGCCTT
CAAGACATCG ACCGCGAACG TAAAGTGATC ATCTTAAGTG AGCTTAAAGA TGAGCATGGT
GAGCTTCTGA TGCCAAGCCG CGAGCTAGAA TACGACATTC TGGTCATGGC GATTGGTTCA
ACATCAAACG ACTTCAACAC TCCTGGCGTT CGTGAGAACT GTATTTTCCT AGACAGTCCA
GAACAAGCGC ACCGTTTCCG CACAGAAATG AACAATGAGT TCCTAAAACT GCACGCGAAA
AACGGTAATG GTACGGTGGA TATAGCGATT GTTGGTGCTG GTGCAACTGG CGTTGAGCTA
TCTGCAGAAC TACACAATGC CGTTAAAGAG CTGCGTACTT ACGGCTTTGG CGATCTTGAC
TCTAGCAAGC TGAACGTCAA CCTGATTGAA GCGGGTGAGC GTATTCTACC TGCGCTTCCT
CCACGTATTT CGGCTGCTGC TCATCAGGAG CTGGTGAAGT TGGGCGTAAA TGTACGCACG
GCAACCATGG TGACTAAAGC TGAAAAAGAT GGCCTCACCA CGAAAGATGG TGAGAAGATC
CCGGCACAAA TCATGGTTTG GGCTGCGGGT ATTAAAGCAC CAGATTTTAT TAAAGATATC
GCTGGTTTAG AAACGAACCG TATCAACCAA CTGGTAGTGA AAAATACACT ACAAACGACG
CGTGATGATG ACATTTTCGT TATTGGTGAC TTAGCACAAT GTACTCAGGC TGATGGTTCG
TTTGTTCCAC CACGTGCGCA AGCTGCGCAC CAAATGGCAA GCCAAGCATT CAGCAACATC
GTTGCGAAGA TCAACGGACG CGAGCTGAAA GACTATGTGT ATAAAGATCA CGGCTCATTG
GTGTCTCTAA GCCGTTTCTC TACCGTTGGT AGCTTGATGG GCAACCTAAC CAAAGGGTCG
ATGATGGTAG AAGGCCGTAT TGCACGTGTC GTTTATATCT CGTTATATCG AATGCACCTG
ATGGCGTTGC ACGGCGTATT TAAAACCGGA CTGATGATGC TCGTGGGCCG TATCAACCGA
GTACTGCGTC CAAACCTTAA GCTTCACTAA
 
Protein sequence
MTRIIVVGGG AGGLELATKL GRTLGRKNRA QITLVDRKAS HLWKPLLHEV ATGSLDEGVD 
ALSYRAHAKN HSFDFQMGSL QDIDRERKVI ILSELKDEHG ELLMPSRELE YDILVMAIGS
TSNDFNTPGV RENCIFLDSP EQAHRFRTEM NNEFLKLHAK NGNGTVDIAI VGAGATGVEL
SAELHNAVKE LRTYGFGDLD SSKLNVNLIE AGERILPALP PRISAAAHQE LVKLGVNVRT
ATMVTKAEKD GLTTKDGEKI PAQIMVWAAG IKAPDFIKDI AGLETNRINQ LVVKNTLQTT
RDDDIFVIGD LAQCTQADGS FVPPRAQAAH QMASQAFSNI VAKINGRELK DYVYKDHGSL
VSLSRFSTVG SLMGNLTKGS MMVEGRIARV VYISLYRMHL MALHGVFKTG LMMLVGRINR
VLRPNLKLH