Gene VEA_003996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003996 
Symbol 
ID8557732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2644494 
End bp2645042 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content45% 
IMG OID646407094 
Productputative ribosomal-protein-serine acetyltransferase 
Protein accessionYP_003286621 
Protein GI262394767 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.69551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCAG ATTTTGAAAT CATTGCGCCC CGCTTAGCGC TCAAGCTCAT CCCTTCTGAA 
GAAGCTCACT TACTACAACG TTTGCTTGCA GAATCCCCTT CCCTACACCA GTGGCTAGAT
TGGTGTAATC AAAACATTAC GTTGAAAGAT GCACAGGACT TCCTGTTGGC AACCCGACTT
AACTGGGTAA AAACAGAAGC TTTCGGTTTC GGTATCTATG AGCGACAAAG TAACACTCTA
GTAGGAATGG CCGCCGTAAA CGAGTTATAT CACACGTTTA ATATGGCAAG TATTGGCTAC
TGGGTTGCTG ACCGCTATCA ACGACAGGGC TATGCTCAAG AAGCCGTTAG AGCCTTGGCT
GAATTCTGCT TTGCAAAGCT GAGTTTAACT CGACTGGAAA TTGTCTGTGA CCCCGACAAC
GAAGCAAGCC AAACCTTAAT TGAGTCAGTC GGTGCACAAA AAGAAACCAT CGCCAGAAAT
CGGTTTATTT TTCATGGTAA GCCTAAGGAT GGCGTTGTGT ACTCACTTTT ACCGGCAGAT
CTAATATAA
 
Protein sequence
MSPDFEIIAP RLALKLIPSE EAHLLQRLLA ESPSLHQWLD WCNQNITLKD AQDFLLATRL 
NWVKTEAFGF GIYERQSNTL VGMAAVNELY HTFNMASIGY WVADRYQRQG YAQEAVRALA
EFCFAKLSLT RLEIVCDPDN EASQTLIESV GAQKETIARN RFIFHGKPKD GVVYSLLPAD
LI