Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003984 |
Symbol | |
ID | 8557720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2629478 |
End bp | 2630233 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646407082 |
Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
Protein accession | YP_003286609 |
Protein GI | 262394755 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTA CGGTTGTCAT TCCTTCGCGT TATGCATCGA GCCGCTTGCC TGGTAAACCG TTAGCGGATA TTGGCGGTAA GCCTATGGTT CAGTGGGTTT ACGAGCAAGC GCTACAAGCG GGTGCGGAAG ATGTTATCGT GGCAACTGAT GACGAGCGTG TTGCTGATGC TGTCTCGTCG TTTGGTGGTA AAGTCTGTAT GACCTCTCCT AACCACGAAT CAGGTACTGA ACGCCTTGCT GAAGTTGTTG AAAAGATGGC TATTCCGGCA GACCACATTA TTGTTAATGT GCAAGGGGAC GAGCCTTTGA TTCCACCATC TATCATTCGT CAGGTTGCTG ATAACTTATC GGGGTGTGAC GCTCCGATGG CGACATTAGC CGTAGAAATA GACTCGGAAG AAGAAGTGTT TAATCCGAAT GCAGTTAAAG TTGTGGCTAA TGAGCAAGGC TATGCGATGT ACTTTAGCCG AGCAACTATC CCTTGGGATC GCGATAACTT TGCCAAACAA GACAAAATCA TTGCCAACCC ATTAATGCGT CATATTGGTA TTTATGCTTA TCGAGCTGGT TTCATTAATA CGTATGTAAA TTGGGCTCCG AGCGCATTGG AGCAGATCGA GTGCCTTGAG CAACTACGAG TGCTTTGGTA CGGTGAAAAA ATTCATGTAG CGGTAGCGAA AGAAGCGCCA GCAGCCGGCG TTGATACGCC AGAAGATCTA GAGGCGGTGC GCGCTATTGT GGCGAAGCAA GCATAA
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Protein sequence | MSFTVVIPSR YASSRLPGKP LADIGGKPMV QWVYEQALQA GAEDVIVATD DERVADAVSS FGGKVCMTSP NHESGTERLA EVVEKMAIPA DHIIVNVQGD EPLIPPSIIR QVADNLSGCD APMATLAVEI DSEEEVFNPN AVKVVANEQG YAMYFSRATI PWDRDNFAKQ DKIIANPLMR HIGIYAYRAG FINTYVNWAP SALEQIECLE QLRVLWYGEK IHVAVAKEAP AAGVDTPEDL EAVRAIVAKQ A
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