Gene VEA_003984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003984 
Symbol 
ID8557720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2629478 
End bp2630233 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content48% 
IMG OID646407082 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_003286609 
Protein GI262394755 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTA CGGTTGTCAT TCCTTCGCGT TATGCATCGA GCCGCTTGCC TGGTAAACCG 
TTAGCGGATA TTGGCGGTAA GCCTATGGTT CAGTGGGTTT ACGAGCAAGC GCTACAAGCG
GGTGCGGAAG ATGTTATCGT GGCAACTGAT GACGAGCGTG TTGCTGATGC TGTCTCGTCG
TTTGGTGGTA AAGTCTGTAT GACCTCTCCT AACCACGAAT CAGGTACTGA ACGCCTTGCT
GAAGTTGTTG AAAAGATGGC TATTCCGGCA GACCACATTA TTGTTAATGT GCAAGGGGAC
GAGCCTTTGA TTCCACCATC TATCATTCGT CAGGTTGCTG ATAACTTATC GGGGTGTGAC
GCTCCGATGG CGACATTAGC CGTAGAAATA GACTCGGAAG AAGAAGTGTT TAATCCGAAT
GCAGTTAAAG TTGTGGCTAA TGAGCAAGGC TATGCGATGT ACTTTAGCCG AGCAACTATC
CCTTGGGATC GCGATAACTT TGCCAAACAA GACAAAATCA TTGCCAACCC ATTAATGCGT
CATATTGGTA TTTATGCTTA TCGAGCTGGT TTCATTAATA CGTATGTAAA TTGGGCTCCG
AGCGCATTGG AGCAGATCGA GTGCCTTGAG CAACTACGAG TGCTTTGGTA CGGTGAAAAA
ATTCATGTAG CGGTAGCGAA AGAAGCGCCA GCAGCCGGCG TTGATACGCC AGAAGATCTA
GAGGCGGTGC GCGCTATTGT GGCGAAGCAA GCATAA
 
Protein sequence
MSFTVVIPSR YASSRLPGKP LADIGGKPMV QWVYEQALQA GAEDVIVATD DERVADAVSS 
FGGKVCMTSP NHESGTERLA EVVEKMAIPA DHIIVNVQGD EPLIPPSIIR QVADNLSGCD
APMATLAVEI DSEEEVFNPN AVKVVANEQG YAMYFSRATI PWDRDNFAKQ DKIIANPLMR
HIGIYAYRAG FINTYVNWAP SALEQIECLE QLRVLWYGEK IHVAVAKEAP AAGVDTPEDL
EAVRAIVAKQ A