| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003976 |
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| Symbol | |
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| ID | 8557712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2618274 |
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| End bp | 2620550 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407074 |
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| Product | pyruvate formate-lyase |
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| Protein accession | YP_003286601 |
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| Protein GI | 262394747 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1882] Pyruvate-formate lyase |
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| TIGRFAM ID | [TIGR01255] formate acetyltransferase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGC AATTTGCTAA AGCTTGGGAA GGTTTTGCTG CAGGCGACTG GCAAAACGAA
GTAAACGTTC GTGATTTCAT TCAGAAGAAC TACACTCCGT ACGAAGGCGA CGAATCTTTC
CTAGTTTCTG AAGGTACTGA AGCGACTAAC AAGCTTTGGG CTAAGGTAAT GGAAGGCATC
AAACAAGAGA ACGCGACTCA CGCTCCTGTT GATTTTGATA CTTCAGTTAT CTCTACCATC
ACTGCTCACG ATGCAGGCTA CATCGAAAAA GACCTAGAAA CTATCGTAGG TCTTCAAACT
GACGCTCCTC TAAAACGTGC GATCATCCCT AACGGTGGTA TCCGTATGGT TGAAGGTTCA
TGCAAAGCCT ACAACCGCGA GCTTGACCCA CAAGTTAAGA AAATCTACAC AGAATACCGT
AAAACTCACA ACCAAGGCGT TTTCGACATC TACACTCCAC AAATCATGGC GTGTCGTAAG
TCTGGCGTAT TGACTGGTCT TCCTGATGCA TACGGTCGTG GTCGTATCAT CGGTGACTAC
CGTCGTGTTG CTCTATACGG TATTGATTTC CTAATGAAGG ATAAATTCGC ACAGTTCTCT
TCTCTACAAG AGCGTTTCGA GAACGGCGAA GACCTACAAA TGACAATGCA GCTTCGTGAA
GAGATCGCAG AGCAACACCG TGCTCTAGGT CAAATCAAAG AAATGGCTGC AAAATACGGT
TGTGACATTT CTCGTCCTGC TGAAACTGCA CAAGAAGCTA TCCAGTGGAC TTACTTCGGT
TACCTAGCTG CTGTTAAATC TCAAAACGGC GCAGCAATGT CTCTAGGCCG TACTTCTACG
TTCCTAGACA TCTTCATCGA GCGCGATATC GCTGCTGGCC GCATCACAGA AGAACAAGCT
CAGGAAATGA TCGACCACTT CGTAATGAAA CTACGTATGG TTCGTTTCCT ACGTACTCCT
GAGTACGATG ATCTATTCTC TGGCGACCCT ATCTGGGCAA CTGAGTCTAT GGGTGGTATG
GGTCTTGACG GTCGTACGCT AGTTACTCGT ACAAACTTCC GTTTCCTAAA CTCACTATAC
ACAATGGGTC CTTCTCCAGA GCCAAACATC ACTGTTCTTT GGTCTGAGCA ACTACCTGAA
GGCTTCAAGA AGTTCTGTGC GAAAGTGTCT ATCGATACTT CTTCAATTCA GTACGAAAAC
GACGACCTAA TGCGTCCAGA CATGAACTCT GACGACTACG CAATCGCATG TTGTGTATCT
CCAATGGTTG TTGGTAAGCA AATGCAGTTC TTTGGTGCTC GTGCTAACCT TGCGAAAACT
ATGCTTTACA CCATCAACGG TGGTGTGGAT GAGAAGCTAA AAATCCAAGT TGGTCCACAA
ATGCCGAAGA TCGAAGGCGA TGTACTGAAC TACGATGAGT TGTGGGAGAA AATGGACCAC
TTCATGGATT GGCTAGCGAA GCAGTACGTG ACTGCACTAA ACGCTATCCA CTTCATGCAC
GACAAGTACA GCTACGAAGC GGCACTAATG GCTCTACATG ACCGTGACGT TAAACGTACT
ATGGCTTGTG GTATTGCTGG TCTATCTGTT GCGGCTGACT CTCTGTCTGC AATCAAATAC
GCAAAAGTTA AGCCAATCCG TGACGAAGAC GGTCTAGCAA TCGACTTCGA AATCGAAGGT
GATTACCCTA AATTTGGTAA CAACGACCCA CGCGTTGATG ATATCGCATG TGAACTTGTT
TCTGTATTTA TGGGCAAAAT CCGTAAGCTT AAGACTTACC GTGATGCAAT CCCTACTCAG
TCAATTCTTA CTATCACTTC AAACGTGGTT TACGGTAAGA AAACTGGTAA CACACCTGAC
GGTCGTCGTG CTGGTGCTCC ATTTGCTCCA GGTGCTAACC CAATGCACGG TCGCGATGAG
AAAGGTGCCG TAGCATCACT AACTTCAGTT GCAAAACTGC CGTTTGCTGA CGCACAAGAT
GGTATCTCTT ACACATTCTC TATCGTACCT AATGCACTAG GTAAAGATGA GGGTTCACAA
CGCGCTAACC TAGCTGGCCT GATGGATGGT TACTTCCACC ACGAAGCGGG TATCGAAGGT
GGTCAACACC TAAACGTGAA CGTTCTTAAC CGCGAAACTC TAGAAGACGC CGTTAAGCAC
CCAGAGAAAT ACCCTCAGCT AACAATCCGT GTATCTGGTT ACGCTGTTCG CTTTAACTCT
CTAACTGCAG AGCAACAAGC TGACGTAATC GCACGTACAT TCACAGAGTC TCTATAA
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| Protein sequence | MAEQFAKAWE GFAAGDWQNE VNVRDFIQKN YTPYEGDESF LVSEGTEATN KLWAKVMEGI
KQENATHAPV DFDTSVISTI TAHDAGYIEK DLETIVGLQT DAPLKRAIIP NGGIRMVEGS
CKAYNRELDP QVKKIYTEYR KTHNQGVFDI YTPQIMACRK SGVLTGLPDA YGRGRIIGDY
RRVALYGIDF LMKDKFAQFS SLQERFENGE DLQMTMQLRE EIAEQHRALG QIKEMAAKYG
CDISRPAETA QEAIQWTYFG YLAAVKSQNG AAMSLGRTST FLDIFIERDI AAGRITEEQA
QEMIDHFVMK LRMVRFLRTP EYDDLFSGDP IWATESMGGM GLDGRTLVTR TNFRFLNSLY
TMGPSPEPNI TVLWSEQLPE GFKKFCAKVS IDTSSIQYEN DDLMRPDMNS DDYAIACCVS
PMVVGKQMQF FGARANLAKT MLYTINGGVD EKLKIQVGPQ MPKIEGDVLN YDELWEKMDH
FMDWLAKQYV TALNAIHFMH DKYSYEAALM ALHDRDVKRT MACGIAGLSV AADSLSAIKY
AKVKPIRDED GLAIDFEIEG DYPKFGNNDP RVDDIACELV SVFMGKIRKL KTYRDAIPTQ
SILTITSNVV YGKKTGNTPD GRRAGAPFAP GANPMHGRDE KGAVASLTSV AKLPFADAQD
GISYTFSIVP NALGKDEGSQ RANLAGLMDG YFHHEAGIEG GQHLNVNVLN RETLEDAVKH
PEKYPQLTIR VSGYAVRFNS LTAEQQADVI ARTFTESL
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