| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003972 |
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| Symbol | |
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| ID | 8557708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2612601 |
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| End bp | 2613371 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407070 |
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| Product | amino acid ABC transporter amino acid-binding protein |
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| Protein accession | YP_003286597 |
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| Protein GI | 262394743 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT GGTTATTAGC AGCAACGATC GCTGCAACGG CAGTATCTGG TGTCGCTCAA
GCGAAAGAAT GGAAAACAGT TCGCTTCGGC ATTGAGGGTG CTTACCCTCC GTTTAGCTGG
ACAGAAACTG ATGGTTCTCT GAAAGGCTTC GACGTAGACA TGGCCAACGC GCTTTGTGAA
GAAATGCAAG TGAAATGTAA GATTGTCGCG CAAGATTGGG ATGGCATCAT TCCTTCTCTA
TTAGCGCGTA AGTACGACGC AATCATCGCT GCGATGTCTA TTACTGAAGA ACGTAAGAAG
AAAGTCGATT TCACTGGCAA ATACGCACTG ATTCCAAACA AATTTATTGC CAAGAAGGGT
GCGAATCTGG ATTTTGACAA CCTAGATGGC AAGAAAATCG CCGTTCAACG TGCAACAACA
CACGACAAAT ATCTGACAGA TAACTATGGC GATAAAGTAG AGATTGTTCG TTACGGTTCT
TTTGATGAGG CTTACCTAGA TTTAGCCAAT GGTCGTGTTG CCGCTGTATT GGGAGACGCC
TCTGCTCTAG AAGAAGGTGT GCTTAATAAA GCGGGCGGCG ACGCGTACGA GTTTGTTGGT
CCGTCATTGA CCGATCCTAA GTGGTTCGGT GAAGGTTTTG GTATTGCCGT GCGTAAACAA
GATAAAGATC TAACGAAGAA ATTGGACGCG GCGATAATTT CACTACGTGA GAAAGGTGTT
TATCAAGAAA TTGCTGGTAA ATACTTTAAC TACGATGTGT ACGGTGAATA A
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| Protein sequence | MKKWLLAATI AATAVSGVAQ AKEWKTVRFG IEGAYPPFSW TETDGSLKGF DVDMANALCE
EMQVKCKIVA QDWDGIIPSL LARKYDAIIA AMSITEERKK KVDFTGKYAL IPNKFIAKKG
ANLDFDNLDG KKIAVQRATT HDKYLTDNYG DKVEIVRYGS FDEAYLDLAN GRVAAVLGDA
SALEEGVLNK AGGDAYEFVG PSLTDPKWFG EGFGIAVRKQ DKDLTKKLDA AIISLREKGV
YQEIAGKYFN YDVYGE
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