| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003970 |
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| Symbol | |
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| ID | 8557706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2611098 |
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| End bp | 2611775 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407068 |
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| Product | histidine ABC transporter permease protein HisM |
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| Protein accession | YP_003286595 |
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| Protein GI | 262394741 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTTT CTTTGATTAT TGAAAGTTTC CCAACTTATC TTCAGGGACT TTGGACGACA
GTTTGGCTGG TAGGATTAGC GTTGGTTATC GGTTTGTGTG TCTCGATTCC ATTAGCCGTG
GCACGTAATA GTACGAATTA TGCCTTTAGC TTACCTTCTT GGGGATTCAT TTACTTTTTC
CGTGGAACGC CGTTGTTGGT CCAGTTGTAT TTGATTTACT ACGGTATGGA TCAGTTCTTT
CCTGTGAAAG ATACCTTGTG GGAAAACGCC TGGTTTTGTG CTTTAGTCGC TTTTATTCTT
AATACGTCGG CTTATACAGC AGAAATTATT CGTGGTGCGA TTAATGGCTT GCCCAAAGGT
GAAGTAGAAG CTGCCAAAGC GTATGGGATG AGTAAGTTTA TGACATACAG ACGTATCATC
TTGCCTAGTG CACTGCGTCG AGCATTACCA GCTTATTCAA ACGAAGTGAT TTTCATGCTG
CACGGTAGTG CGGTCGCGGG TATCGTTACC ATTATGGATC TAACTGGCGC TGCGCGTTTA
GTTAACTCAC GTTACTATGC GCCATTTGAA TCTTTCCTAA CGGCGGGGCT GTTCTACATG
GCACTGACGT TTATGATCTT GTGGTGCTTT AAAGTGGCAG AAAAGCGCTT CTTGGCATAC
CTACGTCCTT TAAGTTAA
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| Protein sequence | MDFSLIIESF PTYLQGLWTT VWLVGLALVI GLCVSIPLAV ARNSTNYAFS LPSWGFIYFF
RGTPLLVQLY LIYYGMDQFF PVKDTLWENA WFCALVAFIL NTSAYTAEII RGAINGLPKG
EVEAAKAYGM SKFMTYRRII LPSALRRALP AYSNEVIFML HGSAVAGIVT IMDLTGAARL
VNSRYYAPFE SFLTAGLFYM ALTFMILWCF KVAEKRFLAY LRPLS
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