| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003959 |
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| Symbol | |
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| ID | 8557695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2598017 |
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| End bp | 2600242 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407057 |
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| Product | isocitrate dehydrogenase [NADP] |
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| Protein accession | YP_003286584 |
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| Protein GI | 262394730 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACAG AAAAACCTAC AATTATCTAC ACCATCACTG ATGAAGCGCC GGCGCTAGCA
ACTTATTCAT TACTACCAAT CATTCAATCA TTCACAGCAT CGTCTGGCAT CAATGTAGAT
ACTCGTGATA TTTCACTAGC AGGTCGAATT ATCGCTAACT TCCCAGAGCA TCTAAAAGAA
GAACAGCGCA TTGGCGATGC GTTGACAGAG CTTGGTGAAC TAGCTCAAAC TCCAGAAGCA
AATATCATCA AGCTACCTAA CATTTCAGCT TCAGTTCCTC AGCTTAAAGC GGCGATTAAA
GAGCTTCAGG CGAAAGGTTA CGATTTACCA AACTACCCAG AAGAACCGAG CACGTACGAA
GAGAAAGCGA TTAAAGCGGC TTACGACAAA ATCAAAGGTA GTGCGGTTAA CCCAGTACTT
CGTGAAGGTA ACTCAGATCG TCGTGCTCCA ACTTCGGTTA AGAACTACGC GAAGAAAAAT
CCACATTCAA TGGGTGCGTG GTCAGCAGAG TCTAAGTCTC ATGTCGCGAG CATGTCAGAT
AATGACTTCT TTGGTAGCGA AAAGTCTACG ACTATCTCTG GTGCAACAGA GGTAAAAATC
GAGTTTGTTG GTAATGATGG TGCAGTTAAA GAGCTCAAGT CTGCGTTCCC ATTACTAGAT
AAAGAAGTCA TTGACACTTC AGTGATGAAG AAGAAGGCGC TGGTTGAATT TTTCGAGAAA
GAGATTGCTG AAGCGAAAGC ACAAGACGTG CTGCTGTCTC TTCATATGAA AGCGACGATG
ATGAAGGTTT CTGACCCAGT CATTTTCGGC CATGCAGTAA AAGTGTACTA CAAAGACGTT
TTCGATAAAT ACGGTAAGCT GTTTGAAGAA CTGGGCGTTG ATGTAAACAA TGGCATTGGT
GATGTTTACT CGAAAATTGA GTCTCTACCT GAAGCGCAAA AAGCAGAAAT TGAAGCGGCA
ATTCAAGCGG TTTACCAAAT TCAACCAGAA CTTGCGATGG TTGACTCTGA TCGTGGTATC
ACAAACTTAC ATGTACCAAG CGACATTATT GTAGACGCTT CTATGCCAGC AATGCTTCGC
TCTTCTGGTC AAATGTGGGG ACCAGATGGT AAACAAAAAG ACACCAAAGC GATGATACCA
GATCGTAGCT ACGCAGGTAT TTACCAAGCG GTGATTGATT TCTGTAAAGA GCACGGCGCA
TTTGACCCGA CCACTATGGG TAGCGTGCCT AACGTTGGCT TAATGGCTCA AAAGGCAGAA
GAGTATGGTT CTCACGACAA GACATTCATT CTAGACGCAG CGGGTACTGT TCGCGTTGTT
GATACTGCGG GTAACGTATT GTTAGAGCAA GCGGTTGAAG AAGGCGATAT CTTCCGTATG
TGTCAGGTGA AGGACGCACC AATCCAAGAC TGGGTTAAAC TAGCAGTGAC TCGCGCACGT
GCAACAGGTG TTCCAGCCGT ATTCTGGCTA GACGAAAACC GTGCGCACGA TGCTGAACTC
ATTAAGAAAG TAAATACCTA CTTACCTGAG CACGATACTG ATGGTCTAGA GATTAAGATC
CTATCTCCTG TTGATGCTTG TAAGTACTCG CTAGAGCGTA TGAAAGCGGG TCTGGATACT
ATCTCTGTAA CGGGTAACGT TCTTCGTGAC TACCTAACAG ACCTGTTCCC AATTCTAGAG
TTAGGTACGT CAGCTAAGAT GCTATCTATC GTTCCATTGA TGAATGGCGG TGGTCTATTT
GAAACAGGTG CTGGTGGTTC TGCTCCTAAG CATGTTCAAC AAGTAGAAAA AGAGAATCAC
CTTCGTTGGG ATTCTTTAGG TGAGTTCTTA GCACTAGCTG CATCCCTAGA ACATCTAAGT
GTGGTGGCAA ACAACCCGAA AGCGCAAGTT TTGGCGGATA CGCTAGACAA AGCGACTGGT
GAGTTTTTAG ATACCAACAA GTCTCCATCA CGTAAAGTGG GCGAATTAGA TAATCGCGGT
AGTCATTTCT ACCTCGCACT TTACTGGGCG AAAGCACTTG CCGAGCAAAC AGACGATGCT
GATCTCGCTG CTGAGTTTGC ACCGATTGCG AAAGCGTTGT CAGAGCATGA AGAAAAAATC
GTCGCTGAGC TAAACAACGC ACAGGGTGTG AAAGGAGAAC TGGGCGGTTA CTACCTGCTA
GACGATGCAT TGGTTTCTAA GTTGATGCGC CCAAGCGAAA CCTTTAACGC GATCATTAAC
AAGTAA
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| Protein sequence | MPTEKPTIIY TITDEAPALA TYSLLPIIQS FTASSGINVD TRDISLAGRI IANFPEHLKE
EQRIGDALTE LGELAQTPEA NIIKLPNISA SVPQLKAAIK ELQAKGYDLP NYPEEPSTYE
EKAIKAAYDK IKGSAVNPVL REGNSDRRAP TSVKNYAKKN PHSMGAWSAE SKSHVASMSD
NDFFGSEKST TISGATEVKI EFVGNDGAVK ELKSAFPLLD KEVIDTSVMK KKALVEFFEK
EIAEAKAQDV LLSLHMKATM MKVSDPVIFG HAVKVYYKDV FDKYGKLFEE LGVDVNNGIG
DVYSKIESLP EAQKAEIEAA IQAVYQIQPE LAMVDSDRGI TNLHVPSDII VDASMPAMLR
SSGQMWGPDG KQKDTKAMIP DRSYAGIYQA VIDFCKEHGA FDPTTMGSVP NVGLMAQKAE
EYGSHDKTFI LDAAGTVRVV DTAGNVLLEQ AVEEGDIFRM CQVKDAPIQD WVKLAVTRAR
ATGVPAVFWL DENRAHDAEL IKKVNTYLPE HDTDGLEIKI LSPVDACKYS LERMKAGLDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKENH
LRWDSLGEFL ALAASLEHLS VVANNPKAQV LADTLDKATG EFLDTNKSPS RKVGELDNRG
SHFYLALYWA KALAEQTDDA DLAAEFAPIA KALSEHEEKI VAELNNAQGV KGELGGYYLL
DDALVSKLMR PSETFNAIIN K
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