| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003958 |
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| Symbol | |
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| ID | 8557694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2597611 |
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| End bp | 2597829 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407056 |
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| Product | cold shock protein CspD |
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| Protein accession | YP_003286583 |
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| Protein GI | 262394729 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACAG GTACAGTAAA GTGGTTTAAC AATGCCAAAG GATTTGGGTT TATTTGTTCA
GATGAAGAAG AGGGAGATAT CTTTGCCCAC TACTCAACTA TCCAGATGGA CGGTTATCGT
ACACTGAAAG CAGGCCAACA AGTCTCATAC GAGATTGAAA AAGGTCCCAA AGGCTGTCAC
GCGAGTAGCG TCGTGCCTCT TGAAGGTCAA GCCAAATAA
|
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| Protein sequence | MATGTVKWFN NAKGFGFICS DEEEGDIFAH YSTIQMDGYR TLKAGQQVSY EIEKGPKGCH
ASSVVPLEGQ AK
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