Gene VEA_003941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003941 
Symbol 
ID8557677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2579504 
End bp2580508 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content45% 
IMG OID646407039 
Producttranscriptional regulator LacI family protein 
Protein accessionYP_003286566 
Protein GI262394712 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACTA TAAAAGACGT TGCTCGCTTA GCCGGCGTTT CCACTACGAC AGTTTCGCAC 
GTTATCAATA AAACGCGTTT CGTTGCAGAA GCAACGCAAG AAAAAGTAAT GAAAGCCGTG
GACGAGTTGA ATTACGCGCC AAGTGCGGTT GCACGCAGCC TAAAGTGTAA CTCAACTCGT
ACGATTGGCA TGTTAGTAAC GCAGTCAACC AACCTATTCT TCTCAGAAGT GATTGACGGG
GTTGAGAGCT ACTGTTACCG CCAAGGCTAC ACTCTGATTC TGTGTAATAC GGGTGGGATT
TACGAAAAAC AACGCGATTA CATCCGTATG CTGGCTGAAA AACGTGTTGA TGGCATCCTA
GTGATGTGTT CTGACTTAAC CGAAGAGCTT AAAGAGATGC TTGACCGTCA TGCCGACATT
CCTAAAGTGG TCATGGATTG GGGTCCAGAA AGCTCACAAG CGGACAAGAT CATGGATAAC
TCAGAAGAAG GTGGCTACAT CGCAACCAAA CATCTGATCG ACAATGGCCA TACTGATATT
GCTTGTCTAA GCGGTCATTT TGAAAAACTA GCTTGCCAAG AGCGCATTGC AGGTTTCCGT
CGCGCGATGA GCGAAGCAAA CCTAACTGTA AATGAGGACT GGATCCTTGA AGGTAACTTT
GAATGTGATA CGGCCGTATT AGTCGCAGAT AAAATTACAG CAATGGACAA ACGTCCGACA
GCGGTATTCT GTTTTAACGA CACAATGGCT CTGGGCCTAA TGAGCCGCCT ACAACAAAAC
GGTATCAAAG TTCCTGATGA TATTTCAGTG ATCGGCTACG ACAACATCGA GCTTGCGGAA
TACTTCTCTC CACCGTTAAC AACTATCCAC CAACCTAAAC GTCGTGTGGG TAAAAATGCG
TTCGAGATCC TACTTGAGCG AATCAAAGAT AAAGAACACG AAAAGCGAAT TTTCGAAATG
CAACCTGAGC TTGTAATTCG AAACACCGTG AAGAAAATGA ACTAA
 
Protein sequence
MATIKDVARL AGVSTTTVSH VINKTRFVAE ATQEKVMKAV DELNYAPSAV ARSLKCNSTR 
TIGMLVTQST NLFFSEVIDG VESYCYRQGY TLILCNTGGI YEKQRDYIRM LAEKRVDGIL
VMCSDLTEEL KEMLDRHADI PKVVMDWGPE SSQADKIMDN SEEGGYIATK HLIDNGHTDI
ACLSGHFEKL ACQERIAGFR RAMSEANLTV NEDWILEGNF ECDTAVLVAD KITAMDKRPT
AVFCFNDTMA LGLMSRLQQN GIKVPDDISV IGYDNIELAE YFSPPLTTIH QPKRRVGKNA
FEILLERIKD KEHEKRIFEM QPELVIRNTV KKMN