Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003941 |
Symbol | |
ID | 8557677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2579504 |
End bp | 2580508 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407039 |
Product | transcriptional regulator LacI family protein |
Protein accession | YP_003286566 |
Protein GI | 262394712 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACTA TAAAAGACGT TGCTCGCTTA GCCGGCGTTT CCACTACGAC AGTTTCGCAC GTTATCAATA AAACGCGTTT CGTTGCAGAA GCAACGCAAG AAAAAGTAAT GAAAGCCGTG GACGAGTTGA ATTACGCGCC AAGTGCGGTT GCACGCAGCC TAAAGTGTAA CTCAACTCGT ACGATTGGCA TGTTAGTAAC GCAGTCAACC AACCTATTCT TCTCAGAAGT GATTGACGGG GTTGAGAGCT ACTGTTACCG CCAAGGCTAC ACTCTGATTC TGTGTAATAC GGGTGGGATT TACGAAAAAC AACGCGATTA CATCCGTATG CTGGCTGAAA AACGTGTTGA TGGCATCCTA GTGATGTGTT CTGACTTAAC CGAAGAGCTT AAAGAGATGC TTGACCGTCA TGCCGACATT CCTAAAGTGG TCATGGATTG GGGTCCAGAA AGCTCACAAG CGGACAAGAT CATGGATAAC TCAGAAGAAG GTGGCTACAT CGCAACCAAA CATCTGATCG ACAATGGCCA TACTGATATT GCTTGTCTAA GCGGTCATTT TGAAAAACTA GCTTGCCAAG AGCGCATTGC AGGTTTCCGT CGCGCGATGA GCGAAGCAAA CCTAACTGTA AATGAGGACT GGATCCTTGA AGGTAACTTT GAATGTGATA CGGCCGTATT AGTCGCAGAT AAAATTACAG CAATGGACAA ACGTCCGACA GCGGTATTCT GTTTTAACGA CACAATGGCT CTGGGCCTAA TGAGCCGCCT ACAACAAAAC GGTATCAAAG TTCCTGATGA TATTTCAGTG ATCGGCTACG ACAACATCGA GCTTGCGGAA TACTTCTCTC CACCGTTAAC AACTATCCAC CAACCTAAAC GTCGTGTGGG TAAAAATGCG TTCGAGATCC TACTTGAGCG AATCAAAGAT AAAGAACACG AAAAGCGAAT TTTCGAAATG CAACCTGAGC TTGTAATTCG AAACACCGTG AAGAAAATGA ACTAA
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Protein sequence | MATIKDVARL AGVSTTTVSH VINKTRFVAE ATQEKVMKAV DELNYAPSAV ARSLKCNSTR TIGMLVTQST NLFFSEVIDG VESYCYRQGY TLILCNTGGI YEKQRDYIRM LAEKRVDGIL VMCSDLTEEL KEMLDRHADI PKVVMDWGPE SSQADKIMDN SEEGGYIATK HLIDNGHTDI ACLSGHFEKL ACQERIAGFR RAMSEANLTV NEDWILEGNF ECDTAVLVAD KITAMDKRPT AVFCFNDTMA LGLMSRLQQN GIKVPDDISV IGYDNIELAE YFSPPLTTIH QPKRRVGKNA FEILLERIKD KEHEKRIFEM QPELVIRNTV KKMN
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