| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003928 |
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| Symbol | |
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| ID | 8557664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2563317 |
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| End bp | 2564054 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646407026 |
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| Product | tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase |
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| Protein accession | YP_003286553 |
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| Protein GI | 262394699 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4106] Trans-aconitate methyltransferase |
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| TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000490734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCTA AGAGCAATCC AGATACTATT TTTTCGGCTC CAATCGATAA AATTGGGGAT
TTCACGTTCG ATGAACGCGT AGCGGAAGTA TTTCCTGACA TGATTCAACG ATCGGTGCCG
GGTTACAGCA ACATTATTTC TGCAATTGGT ATGCTGGCAG AGCGTTTTGT AAAGCCCCAC
TCAAACATCT ATGACCTTGG CTGTTCTTTG GGTGCTGCAA CATTGTCTAT GCGTCGCCAT
ATCAAACAAG AAGGTTGCCA AATCATCGCA GTGGACAACT CTCCTGCGAT GGTTGAGCGT
TGCAAATTGC ATGTAAACGC GTACCGAAGC GATACTCCTG TAGATGTGGT TGAAGCGGAT
ATTCGTAATA TCGATATTGA AAACGCATCA GTTGTCGTAC TGAACTTTAC TCTGCAATTT
CTTTCTCCAG ACGATCGTTA CGCCCTACTT GAACGAATCT ATGCAGGTCT ACGTCCAGGC
GGAATTTTGA TTTTGTCGGA GAAATTCGTC TTCGAAGATG AAGTGTCAAA CGAGCTATTA
ATTGACCTTC ACCACGACTT TAAACGTGCA AATGGTTATA GCGAACTAGA AATCAGCCAA
AAGCGCAGCG CGATAGAAAA CGTAATGCGC CCAGATTCAA AGAAAGAGCA TAAAGAGCGT
TTCGCTAAAA TTGGCTTTTC TAGCTACGAT GTTTGGTTCC AATGCTTTAA CTTTGGCTCT
ATGTTCGCAA TTAAATAA
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| Protein sequence | MNPKSNPDTI FSAPIDKIGD FTFDERVAEV FPDMIQRSVP GYSNIISAIG MLAERFVKPH
SNIYDLGCSL GAATLSMRRH IKQEGCQIIA VDNSPAMVER CKLHVNAYRS DTPVDVVEAD
IRNIDIENAS VVVLNFTLQF LSPDDRYALL ERIYAGLRPG GILILSEKFV FEDEVSNELL
IDLHHDFKRA NGYSELEISQ KRSAIENVMR PDSKKEHKER FAKIGFSSYD VWFQCFNFGS
MFAIK
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