Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003927 |
Symbol | |
ID | 8557663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2562390 |
End bp | 2563223 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407025 |
Product | hypothetical protein |
Protein accession | YP_003286552 |
Protein GI | 262394698 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000613561 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTCGC ACAATCAATG GCAACAAAGC TTTTACGGCA GCGGGACAAA GCCCGCTGAA CGTTTAGAAA AGTATGCACA GGTGTTCCAT ACCGTGGAAG GCAACACGAC ATTTTATGCC ACGCCGACGC TCAACACGGT GCAAAACTGG AGAGCAGCAA CCCACGATGA TTTTCGCTTT ACTTTCAAAC TTCCTAAAGC CATCACTCAT GAGCAAATGC TAAGAGGTTG CAGCGAACAG CTGAGAGACT TCATGAAAGT CATGGAGCCG TTGCATGACC GTGTGGGGCA ATGGACAATT CAATTGCCAG CCGCATTTGG TCCTGAGCAC CTTGATCGAC TGAAAAAGTT CTGTGCGAGC TTTCCACCTA ACTTCCCTCT TGGTGTTGAG GTTCGTCATA TGGCATTTTT CTCCAAAGGT GAAGAAGAGC GAGCGCTTAA CCAATGGTTA GTAGAAAATA ACATTGACCG CATTATTATG GATAGCCGCC CTGTCTTTGC CGCTAAGCCA GACAATGAAG CGGTCATTGA TGCGCAAATG AAAAAACCAA GAGTACCAGT CCACGCCATT GCTACCGCTT CACACCCTTT GATTCGCTTT ATTGGTCATC CAGAAGAACA GCAAAATTAC GAGTTTTTTA CACCATGGCT CAGCAAGTTG CCGCAATGGA TTGCAGAAGG TAAACAGCCG TATGTCATGA TCCATACTGC GGACAATATA ATTGCGCCGG AGTTGGCAGC CAATCTGTAT AAAGACATAC AAAAGCGTAT AACACTTCCT GACTTGGCAT CTTTCCCGGC TAACGATGGC AACTCGCAGT TACAGATGTT CTAA
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Protein sequence | MWSHNQWQQS FYGSGTKPAE RLEKYAQVFH TVEGNTTFYA TPTLNTVQNW RAATHDDFRF TFKLPKAITH EQMLRGCSEQ LRDFMKVMEP LHDRVGQWTI QLPAAFGPEH LDRLKKFCAS FPPNFPLGVE VRHMAFFSKG EEERALNQWL VENNIDRIIM DSRPVFAAKP DNEAVIDAQM KKPRVPVHAI ATASHPLIRF IGHPEEQQNY EFFTPWLSKL PQWIAEGKQP YVMIHTADNI IAPELAANLY KDIQKRITLP DLASFPANDG NSQLQMF
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