Gene VEA_003927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003927 
Symbol 
ID8557663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2562390 
End bp2563223 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content47% 
IMG OID646407025 
Producthypothetical protein 
Protein accessionYP_003286552 
Protein GI262394698 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000613561 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTCGC ACAATCAATG GCAACAAAGC TTTTACGGCA GCGGGACAAA GCCCGCTGAA 
CGTTTAGAAA AGTATGCACA GGTGTTCCAT ACCGTGGAAG GCAACACGAC ATTTTATGCC
ACGCCGACGC TCAACACGGT GCAAAACTGG AGAGCAGCAA CCCACGATGA TTTTCGCTTT
ACTTTCAAAC TTCCTAAAGC CATCACTCAT GAGCAAATGC TAAGAGGTTG CAGCGAACAG
CTGAGAGACT TCATGAAAGT CATGGAGCCG TTGCATGACC GTGTGGGGCA ATGGACAATT
CAATTGCCAG CCGCATTTGG TCCTGAGCAC CTTGATCGAC TGAAAAAGTT CTGTGCGAGC
TTTCCACCTA ACTTCCCTCT TGGTGTTGAG GTTCGTCATA TGGCATTTTT CTCCAAAGGT
GAAGAAGAGC GAGCGCTTAA CCAATGGTTA GTAGAAAATA ACATTGACCG CATTATTATG
GATAGCCGCC CTGTCTTTGC CGCTAAGCCA GACAATGAAG CGGTCATTGA TGCGCAAATG
AAAAAACCAA GAGTACCAGT CCACGCCATT GCTACCGCTT CACACCCTTT GATTCGCTTT
ATTGGTCATC CAGAAGAACA GCAAAATTAC GAGTTTTTTA CACCATGGCT CAGCAAGTTG
CCGCAATGGA TTGCAGAAGG TAAACAGCCG TATGTCATGA TCCATACTGC GGACAATATA
ATTGCGCCGG AGTTGGCAGC CAATCTGTAT AAAGACATAC AAAAGCGTAT AACACTTCCT
GACTTGGCAT CTTTCCCGGC TAACGATGGC AACTCGCAGT TACAGATGTT CTAA
 
Protein sequence
MWSHNQWQQS FYGSGTKPAE RLEKYAQVFH TVEGNTTFYA TPTLNTVQNW RAATHDDFRF 
TFKLPKAITH EQMLRGCSEQ LRDFMKVMEP LHDRVGQWTI QLPAAFGPEH LDRLKKFCAS
FPPNFPLGVE VRHMAFFSKG EEERALNQWL VENNIDRIIM DSRPVFAAKP DNEAVIDAQM
KKPRVPVHAI ATASHPLIRF IGHPEEQQNY EFFTPWLSKL PQWIAEGKQP YVMIHTADNI
IAPELAANLY KDIQKRITLP DLASFPANDG NSQLQMF