| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003920 |
|---|
| Symbol | |
|---|
| ID | 8557656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2553630 |
|---|
| End bp | 2554766 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646407018 |
|---|
| Product | cytochrome d ubiquinol oxidase subunit II |
|---|
| Protein accession | YP_003286545 |
|---|
| Protein GI | 262394691 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0165985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATT ACGAAATCTT GCGACTCATC TGGTGGGTAC TAATCGGTGT TCTACTAGTT
GGTTTTGCAG TAACAGACGG TTTCGATATG GGTGTAGGCG CGCTTGTACC TATTATCGGT
AAAAACGACA CGCAACGTCG CGTCATGATT AACTCAATAG CCCCTCACTG GGATGGTAAC
CAAGTTTGGC TTATCACTGC TGGTGGTGCA TTGTTTGCAG CTTGGCCTTT GGTTTATGCA
ACGTCATTTT CAGGCTTCTA CTTAGCGATG ATTTTGACAC TAGCAGCGCT ATGGCTTCGT
CCTCTGGGCC TAGACTACCG CTCTAAAATC GAAGATCCAA AGTGGCGTAA TACCTGGGAT
ATCTGTATCT CAATCAGTGG TTTTGTTCCA CCAATCATCT TTGGTGTAGC GTTTGGCAAC
CTACTACAGG GTGTACCATT CCAATTGAGT GAGTTCTTGA TGCCAACATA CCATGGCTCA
TTCTTTGGTC TTCTAAACCC ATTTGCACTG CTGTGTGGCT TAGTTAGTTT GTTCATGATT
TTGATGCAAG GTTCGACTTG GCTACAAATG AAAACAACGG GCGAAGTGCA TGTGCGTGCT
CGCAACGTTG CTCAGTTGGC TGGTTTACTG ACGGTTGCAG CGTTTGTAGC TGCTGGTTTC
TGGATCCAAA ATATCGATGG TTACGTCATT GTTGGCGGTA TCGACACTAA TGCAGCTTCT
AACCCTCTAA ACAAAGAGGT AATCCGTGAA GCTGGTGCGT GGATGAAGAA TTTTGAAAAC
TACCCACTAC TATGGGCTGC TCCTGTACTA GGTGTCGCAA TGCCGCTTCT TGCCGTATTG
GCATCTCGTC TTGAAAAATG TGCGATTTCG TTCATTACTT CAAGCTTGGG TGTTGCTGGC
GTTATCTTTA CTGCAGGTTT TGCGATGTTC CCATTCATCA TGCCTTCAGA CTTAATGCCA
AGCCACAGCT TAACAATGTG GGATGCAACG TCATCTGAAC TGACTCTGAA TCTAATGACA
GGCGTTGCGT TTGTTATGGT ACCAATCATC CTTGGTTACA CGTCTTGGAC TTACTACAAG
ATGTTTGGTC GCCTTGATGA TCAGTACATT GAAGACAACA AAAACTCACT TTACTAA
|
|---|
| Protein sequence | MFDYEILRLI WWVLIGVLLV GFAVTDGFDM GVGALVPIIG KNDTQRRVMI NSIAPHWDGN
QVWLITAGGA LFAAWPLVYA TSFSGFYLAM ILTLAALWLR PLGLDYRSKI EDPKWRNTWD
ICISISGFVP PIIFGVAFGN LLQGVPFQLS EFLMPTYHGS FFGLLNPFAL LCGLVSLFMI
LMQGSTWLQM KTTGEVHVRA RNVAQLAGLL TVAAFVAAGF WIQNIDGYVI VGGIDTNAAS
NPLNKEVIRE AGAWMKNFEN YPLLWAAPVL GVAMPLLAVL ASRLEKCAIS FITSSLGVAG
VIFTAGFAMF PFIMPSDLMP SHSLTMWDAT SSELTLNLMT GVAFVMVPII LGYTSWTYYK
MFGRLDDQYI EDNKNSLY
|
|---|
| |