Gene VEA_003915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003915 
Symbol 
ID8557651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2551488 
End bp2551931 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content46% 
IMG OID646407013 
ProductTol biopolymer transport system TolR protein 
Protein accessionYP_003286540 
Protein GI262394686 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0762164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGTT ATCAACCTAA AAAGCGAAAA ATGACAGCGG AGATCAACGT TGTTCCGTAC 
ATTGACGTAA TGCTCGTACT GTTGATCATT TTTATGGCGA CCGCTCCATT TGTGACTCAA 
GGCGTCGATG TTGATCTTCC GAAAACATCG ACCGCTGAAT CTATGCAAGA CCTTGCTGGC 
GAAACTGACA GTAGTTTTAT CATCATCGAA ATTGATAGCG AGGGTAATTT AGGCCTAAGC 
GTAAATGATG AAGAACTTCA GCGAGGTTTG TCGTTACAAG ATGTTATTGT GCGAGTGAAA 
GCGGAGCGAG AGGTTAAGCC AGATTCACCA GTTGCGGTAG GTGGCGACGC GGCAACACCA 
TATGCCGATG TTGTGCTATT GCTGGATGAA CTAAGTCGAG CTGGTATCCC TAAGGTAGGT 
CTAATGACCG ATATCAGGGA ATAG
 
Protein sequence
MAGYQPKKRK MTAEINVVPY IDVMLVLLII FMATAPFVTQ GVDVDLPKTS TAESMQDLAG 
ETDSSFIIIE IDSEGNLGLS VNDEELQRGL SLQDVIVRVK AEREVKPDSP VAVGGDAATP 
YADVVLLLDE LSRAGIPKVG LMTDIRE