| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003911 |
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| Symbol | |
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| ID | 8557647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2547719 |
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| End bp | 2548471 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407009 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003286536 |
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| Protein GI | 262394682 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.100041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGTA ACACTAAGCG CGCTGTTGCG CTTACGTTAC TGGCAAGTGC AGCGAACTTT
GCGTTCGCTG CACCAGCTCC AGTATCCGAT CTCAACAGCA CATCATCCGT CTCTAAGAGC
CGTTCATCTG AAACGGAAGT AGAGCGTCTA GAACGTTTGC TCCAAAACCG CAATCGCGTT
CAGCTCCAAA TGCAACAGCA AATTGACCAA ATGTCACAAG AGATCAGTGA ATTGCGTGGT
CAATTAGAGC GAAATAGCTA CGAAATGAAA CAAATGTTGC AACGTCAACG TGAGTTGTTT
GTCGAGCTAG ATCGTGTGCG TGGAGAAATC AAATCCGCGC CTGCGCAAGA AGCGAAACCG
GCTAAAACAG GTGGTCAGTA CACACCAAAT GTTGATGAGC AAACGGCATA CCAAAATGCA
GTCGACCTCA TCCTCAAGAA ACGTGACTAC ACTGGCGCAA TTGCAGCGTT CCAGCAGTTC
CAGAAAGATT ATCCTGACTC CACATACTCA GCGAATTCTC ACTATTGGCT AGGCCAATTG
TACTTCGCTA AGAAGCAGGA CAAAGATGCT GTAAAGAGCT TTGCTGCGGT GGTGTCTTAT
AAAGACTCCA ATAAGCGAGC CGATGCTTTG CTCAAGTTAG GTGAAATCGC TGAGCGTAAT
AACAATGCAG CTCAAGCGAA AAAGTACTAC CAACAAGTGG TTGATGAATA CCCAGGTAGT
GCATCTGCAA AACTTGCCAG CTCTAAGCTG TAA
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| Protein sequence | MFSNTKRAVA LTLLASAANF AFAAPAPVSD LNSTSSVSKS RSSETEVERL ERLLQNRNRV
QLQMQQQIDQ MSQEISELRG QLERNSYEMK QMLQRQRELF VELDRVRGEI KSAPAQEAKP
AKTGGQYTPN VDEQTAYQNA VDLILKKRDY TGAIAAFQQF QKDYPDSTYS ANSHYWLGQL
YFAKKQDKDA VKSFAAVVSY KDSNKRADAL LKLGEIAERN NNAAQAKKYY QQVVDEYPGS
ASAKLASSKL
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