| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003878 |
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| Symbol | |
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| ID | 8557613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2507065 |
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| End bp | 2507691 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646406975 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_003286503 |
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| Protein GI | 262394649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000605758 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC GATTTTCAGC GAAACTTTTC TCAGCGCTAG TTTTAAGCGT TTCTTTCTTC
TCAGCTGCGA ATGCAGCATC TCCAAAAGAT GAACTCAATA AACGTCTCGC AATGAACGAG
GGTTTCAGTG CCGATTTCTC CCAGCAAGTG ATCAGCCCTG AAGGTGAAAC GGTAATGGAA
GGTGAGGGCA CGGTTGAAAT CGCTCGTCCA AGCTTGTTCC GTTGGAGTAC GACTTTCCCT
GATGAAAACC TTTTAGTATC TGACGGTAAG ACGTTGTGGT ATTACAGTCC ATTCATTGAA
CAAGTAAGCA TTTACTGGCA AGAGCAAGCG ACCGAGCAAA CACCATTTGT GCTGTTAACT
CGCAATAGAG CAAGCGACTG GGATAACTAT AAGATTTCTC AGAAAGGTAA TGAGTTTACG
CTCATTCCAA CGGCAATTGA CTCTACTCAA GGCCAATTCC AGATTAATAT TGATGCAAAA
GGCGTAGTGA AAGGCTTTAA CGTCATTGAG CAAGATGGTC AGAAAGGGCT GTTTACTTTT
AGTAATGTTA AGCTTGGTAA ACCAAAGGTA GACAGATTTA CATTCACAAT TCCAGATGGC
GTGGAAGTGG ATGACCAAAG GAATTAA
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| Protein sequence | MKKRFSAKLF SALVLSVSFF SAANAASPKD ELNKRLAMNE GFSADFSQQV ISPEGETVME
GEGTVEIARP SLFRWSTTFP DENLLVSDGK TLWYYSPFIE QVSIYWQEQA TEQTPFVLLT
RNRASDWDNY KISQKGNEFT LIPTAIDSTQ GQFQINIDAK GVVKGFNVIE QDGQKGLFTF
SNVKLGKPKV DRFTFTIPDG VEVDDQRN
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