Gene VEA_003871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003871 
Symbol 
ID8557606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2500180 
End bp2501232 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content48% 
IMG OID646406968 
Productbiotin synthase 
Protein accessionYP_003286496 
Protein GI262394642 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGTTC GTCATAACTG GACGCATGCT GAAGTGCGCG ATCTCATGGA AAAACCATTC 
ATGGATCTCC TATTCGAAGC GCAACTTGTA CATCGTCAAT ATCAACAAAC CAACCATGTT
CAAGTAAGCA CGCTTCTGTC GATTAAGACA GGTGCTTGTC CAGAAGATTG TAAGTACTGT
CCTCAGAGTG CTCGTTACAC CACAGACATC GAGAAAGAGC GTCTGATGGA AGTTGAGCGT
GTACTCGATG CTGCGCAAAA AGCCAAAAAT GCTGGCTCTA CTCGATTCTG TATGGGGGCA
GCATGGAAAA ACCCGAAAGA GCGTGACATG CCGCATTTGA CCGACATGAT CAAAGGCGTG
AAGGGCATGG GTTTAGAAAC GTGTATGACA TTAGGCATGC TGACGCCAGA TCAAGCAAAG
CAATTGGCAA CTGCTGGTCT GGATTACTAC AACCACAACC TAGATACCTC ACCTGAGTTT
TACGGCAACA TCATTACCAC ACGTACTTAC CAAGACCGTT TAGACACTTT GTCTCACGTT
CGTGATGCTG GCATGAAGAT CTGTTCCGGT GGCATCATCG GCATGGGTGA AAGTGCTAAC
GACCGAGCAG GTTTGTTGGT TGAACTGGCT AATTTGCCAG TACATCCTGA AAGTGTGCCA
ATCAACATGC TGGTTAAGGT GAAGGGTACA CCATTGGAAG AAGTGGACGA CGTTGAGCCG
TTCGACTTTA TTCGTCTGAT TGCAATAGCA CGAATTATGA TGCCCCAATC CGCAGTCCGT
TTATCGGCTG GTCGTGAAAA CATGAACGAA CAAATGCAAG CGCTGTGTTT TATGGCGGGT
GCAAACTCCG TCTTCTATGG TTGCAAACTT CTGACCACGC CAAACCCTTC TGAAGACAAA
GACATGATGC TGTTCGACAA GCTCGGCATT AACAGCCAAG AGGTGTCTCA AAAACCTGAT
GAAATCGAAG AAAACGAGTT GCTGGATCGC GTCGTAGAGC GCGTTGCTGC TCGTCCGACA
AAAGACGACC TTTTCTACGA TGCCAGCGTT TAA
 
Protein sequence
MEVRHNWTHA EVRDLMEKPF MDLLFEAQLV HRQYQQTNHV QVSTLLSIKT GACPEDCKYC 
PQSARYTTDI EKERLMEVER VLDAAQKAKN AGSTRFCMGA AWKNPKERDM PHLTDMIKGV
KGMGLETCMT LGMLTPDQAK QLATAGLDYY NHNLDTSPEF YGNIITTRTY QDRLDTLSHV
RDAGMKICSG GIIGMGESAN DRAGLLVELA NLPVHPESVP INMLVKVKGT PLEEVDDVEP
FDFIRLIAIA RIMMPQSAVR LSAGRENMNE QMQALCFMAG ANSVFYGCKL LTTPNPSEDK
DMMLFDKLGI NSQEVSQKPD EIEENELLDR VVERVAARPT KDDLFYDASV