Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003864 |
Symbol | |
ID | 8557599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2494564 |
End bp | 2495289 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646406961 |
Product | oxidoreductase short-chain dehydrogenase/reductase family |
Protein accession | YP_003286489 |
Protein GI | 262394635 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.013707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAATA CTATCTTAAT CACTGGCGCT ACCTCCGGAA TAGGGAAGCA ACTGGCTTTA GATTACGCGA ACTCTGATTG GAGCGTTATT GCTTGTGGGC GAAACAAAGA CGTTCTTGCT GAATTGGGGG CTGCTTCTTC TAATATCCAT ACATTGCAGT TTGACGTGAC AAACCATGAA CAAACTCAGC AGGCGCTGTC CAGTTTGCCT TTCACGCCGA GTACCTGGGT TTTTAATGCA GGGGATTGTG AGTATATGGA CAACGGTGTG GTTGACGCGA AACTCATGGC GCGTGTGATG AATGTAAACG TCGTTGGTGT TGCCAACTGC GTAGAAGGTT GCCAACCACA CTTAGATAAA GGGCATCGCA TCGTTATCGT AGGTTCTATT GCTTCAGAAG TTGCGTTGCC AAGGGCTGAA GCCTACGGCG CTTCTAAGGC TGCTGTGAGC TACTTTGCTC GCACATTAGC TGTTGATTTG AAGAAGAAGG GCATTCAAGT GGTGACCGTG TTCCCAGGCT TTGTGGAAAC CCCGTTAACT GACAAAAATG ACTTCGAAAT GCCGATGATT ATTTCTACGC GGCAAGCCTC GAACTCTATC AGAAAACAGT TGGCTGCCAA CAAGACTCAC ATCTATTTCC CCGCGAGGTT TACCAGTATT TTACGTTTTA TCTCGTTACT TCCATACAGT TGGCAAGCTC GCCTAACTGC TAAACTCGTG TCATAA
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Protein sequence | MNNTILITGA TSGIGKQLAL DYANSDWSVI ACGRNKDVLA ELGAASSNIH TLQFDVTNHE QTQQALSSLP FTPSTWVFNA GDCEYMDNGV VDAKLMARVM NVNVVGVANC VEGCQPHLDK GHRIVIVGSI ASEVALPRAE AYGASKAAVS YFARTLAVDL KKKGIQVVTV FPGFVETPLT DKNDFEMPMI ISTRQASNSI RKQLAANKTH IYFPARFTSI LRFISLLPYS WQARLTAKLV S
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