Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003851 |
Symbol | |
ID | 8557586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2481288 |
End bp | 2482889 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406948 |
Product | malate Na(+) symporter |
Protein accession | YP_003286476 |
Protein GI | 262394622 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00269434 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA TAGATTTTTC TAGTTCTCCT GTTTCATTAT TGCCACCTAT TGTCGCTTTG ACTTTGGCGA TTCTGACTCG ACGTGTATTA GTTTCCTTAG GTGTAGGTAT CGTGCTGGGT GCGGTTCTAC TTAATAGCTG GTCTATCGGT GATACCGTTA GTTACGTGAG TTCTCAAGTT TCTTCTGTCT TTATTGAAGA TGGCGGAATT AACACTTGGA ACATGAGCAT TGTTGGTTTC CTAATCTTAT TAGGTATGAC AACTGCATTA TTAACGCTAT CTGGTGGTAC TCGTGCATTT GCCGAATGGG CACAATCTCG AGTGAAGAGT AAACGCGGCT CCAAACTTCT TGCTGCCTTT TTAGGCGTAT TCATTTTTGT CGACGATTAC TTTAACAGTC TTGCTGTTGG TGCCATTTCT CGTCCAGTAA CCGATCGTTT TTATGTGTCT CGCGCGAAGC TTGCATACAT TCTAGACTCA ACTGCTGCAC CAATGTGTGT GATCATGCCT GCTTCTAGCT GGGGTGCTTA CATTATTACG ATTATCGGCG GTATCTTAGT CTCACATGGG ATCACTGAGT ATTCGGCTCT TGGCGCGTAC GTTCGTCTTA TTCCAATGAA CTTCTACGCA GTTTTTGCAC TGCTTATGGT GTTTGCTGTG GCGTGGTTTG GCCTCGATAT CGGTAAGATG CGTGAGCATG AAATCTCTGC ATCTCAAGGC CGCGGCTTTG ATAAAGACAA AGAAAACGAC TCGCAAGAAG CGCATGATCT AAACGAAGAG CTAGATATCC GTGAAAGCGA AAAGGGTAAA GTGTCAGACT TGGTACTTCC TATCGTGACG CTGATTATTG CGACTATCGC TTCTATGCTT TACACGGGTG GCCAAGCATT GGCTGCTGAC GGCAAAGAGT TTGCGCTTCT AGGTGCGTTT GAAAATACAG ATGTAGGCAC ATCACTAATC TACGGTAGCT TGCTTGGCTT AGCTGTCGCA TTATTTACTG TTGTGAAGCA AGGTCTTCCA ATGGGTGAAA TTGCACGCAC ACTTTGGATT GGTGCTAAGT CTATGTTTGG AGCGATTCTA ATCCTAGTAT TTGCTTGGAC TATCGGTTCG GTTATCGGTG ACATGAAGAC GGGTTCTTAC CTTTCTACAA TGGCTCAGGG CAATATCAAT CCACATTGGC TACCAGTTAT CCTATTCTTG TTGTCTGGTC TAATGGCATT TTCAACAGGT ACTTCTTGGG GTACGTTCGG CATTATGCTT CCAATCGCGG GTGATATGGC TGGTGCAACT GATCTTGCGC TAATGCTCCC AATGCTAAGT GCAGTTTTAG CCGGTGCCGT TTTTGGTGAC CATTGTTCAC CTATTTCCGA TACCACTATT CTGTCGTCGA CTGGTGCACG TTGTAATCAT ATTGATCACG TATCGACCCA GTTGCCTTAT GCGTTGTCCG TGGCGCTAGT TTCCTGTGTT GGCTTCATTA CTTTGGGGAT GACTGCGTCA ATTGCATTCT CATTCATCGC TGCATCAATC ACATTTATTA TTGTATGTGG AGCACTTTCT TGGTTGTCGA AGTCTAAAAT GGCATCGTGC CAAAATGTCT AG
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Protein sequence | MNLIDFSSSP VSLLPPIVAL TLAILTRRVL VSLGVGIVLG AVLLNSWSIG DTVSYVSSQV SSVFIEDGGI NTWNMSIVGF LILLGMTTAL LTLSGGTRAF AEWAQSRVKS KRGSKLLAAF LGVFIFVDDY FNSLAVGAIS RPVTDRFYVS RAKLAYILDS TAAPMCVIMP ASSWGAYIIT IIGGILVSHG ITEYSALGAY VRLIPMNFYA VFALLMVFAV AWFGLDIGKM REHEISASQG RGFDKDKEND SQEAHDLNEE LDIRESEKGK VSDLVLPIVT LIIATIASML YTGGQALAAD GKEFALLGAF ENTDVGTSLI YGSLLGLAVA LFTVVKQGLP MGEIARTLWI GAKSMFGAIL ILVFAWTIGS VIGDMKTGSY LSTMAQGNIN PHWLPVILFL LSGLMAFSTG TSWGTFGIML PIAGDMAGAT DLALMLPMLS AVLAGAVFGD HCSPISDTTI LSSTGARCNH IDHVSTQLPY ALSVALVSCV GFITLGMTAS IAFSFIAASI TFIIVCGALS WLSKSKMASC QNV
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