| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003818 |
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| Symbol | |
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| ID | 8557553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2448868 |
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| End bp | 2449755 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406915 |
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| Product | peptide transport system permease protein SapC |
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| Protein accession | YP_003286443 |
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| Protein GI | 262394589 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAACAA ATAACGTTTA TCAGGAAGAG CGCATTCCAA CTCAGTTTGA GCGATTTTGG
CGAAGTTACC GCGCCAACGG GCTAGCCATG TTTGGCCTAT GGTGCTTGGT ATTTATCGTC
CTAATTACCA TTTTTGCGCC ACTGCTTGCG CCGTTTGATG CCCAAGCACA GTCAGGCGAA
TTGCTTGTGC CGCCATCATG GGCCCCAGCA GGAACGGTTG ATTACTTTTT GGGAACCGAT
GACTTAGGCC GAGACATTCT GTCACGCTTG ATCATGGGCT CTCAACTTAC ATTTGGTGCA
GCCGTTGCCA TCACTGCGAT TGCCGCGGTC GTAGGTTGTT TGATTGGCGT ATTAGCAGGT
ATGACGAAAG GCTTACTCTC AAGTACCCTC AATCACTTGC TCGATACTGT CATGTCGATT
CCCTCGCTGT TATTAGCAAT CATTTTTGTG GCATTTCTAG GTTTTGGTGG GTTCAACATT
TTACTCGCGA TCTGCTTGGC ATTGATTCCG CGTTTTATTC GTTCTGTTTA TATCGCAGTC
CACACCGAAG TTGAAAAAGA CTACATCATG GCGGCACGCC TTGATGGCGC TAATGATTTC
TACTTGTTGT GGAGTTCAAT TCTTCCCAAC ATATTGACGG TTATTGCTGC TGAAATCACG
CTCGCGCTGT CTGCTGCGAT TTTAGATATT ACTGCGCTGG GCTTTCTTGG CTTAGGCGCA
CAAGCACCAA GTACTGAGTG GGGAGCGATA TTAGGTGACT CTGTCGAGTT GATTTATATT
GCACCTTGGA CCGTAACCCT ACCCGGCCTA ACCATCATGT TTACCGTTAT TACCCTAAAC
TTAGTAGGTG AAGGTGTACG TCAAGCGCTT AATGCGGGGA TCGAATAA
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| Protein sequence | MLTNNVYQEE RIPTQFERFW RSYRANGLAM FGLWCLVFIV LITIFAPLLA PFDAQAQSGE
LLVPPSWAPA GTVDYFLGTD DLGRDILSRL IMGSQLTFGA AVAITAIAAV VGCLIGVLAG
MTKGLLSSTL NHLLDTVMSI PSLLLAIIFV AFLGFGGFNI LLAICLALIP RFIRSVYIAV
HTEVEKDYIM AARLDGANDF YLLWSSILPN ILTVIAAEIT LALSAAILDI TALGFLGLGA
QAPSTEWGAI LGDSVELIYI APWTVTLPGL TIMFTVITLN LVGEGVRQAL NAGIE
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