Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003816 |
Symbol | |
ID | 8557551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2446300 |
End bp | 2447919 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406913 |
Product | peptide transport periplasmic protein SapA |
Protein accession | YP_003286441 |
Protein GI | 262394587 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCTT TTATAAGATT ATCGCTGAGC CTTATTGGGA TTAGCCTACT GACCGCTTGT GGTGATGAAA TTGACCACAA TGACATTCGC AAAGCTGGCT TTGTGTTTTG CGGACAAGGT AAGCCAACTA CGTTTAACCC TCAGCTTATT GATAGCGGTA TTACCGCAGA GGCACTGAGC CCGCAGTTGT ACGATACGCT GCTCACGCTC GATCCTAAAT CACATCAGCC AGTAGCAAAT ATCGCTGAGA GTTGGTCTGT GAATGAGTCA GGAACGGAAT ACACGTTTAA GCTTAAACGT AATGTTCAAT TCCAAACCAC GTCCTGGTTC ACTCCCACTC GCCCATTGAA TGCAAAGGAT GTGGTATTTA GCTTCAAGCG AATCATTGAT GTAGACCATC CTTTTCACCA AGTAGGTGGT GGTTTTTATC CATGGTTTGC AGGGTTAGAT TTTCAAAACC TGCTGCAAGA CGTGACTGCG ATTGACGAGC ATACGGTAAG GTTTACCTTA TCTCAGCCAA ATTTTTCCTT CTTGGCAAAT ATTGCCACCA GCCATGCTGT CATATTGTCT GCGGAGTACG GACAGCAACT GGCAGCAAAA GATCATAAAG AAGAAATCGA CCAACTTCCT ATCGGTACCG GCCCATATCA ACTAAAAGAG TACCAAGTGA ACGACTTGAT TCGATTAGAG CGTCATTCTA ATTACTGGAA GTCACCAGCA AAAATGGAAC AAGTGGTGTT CGATATCTCT CATCGAGGCA CTGGTACCTT GGCGAAACTT TTAAGAAACG AGTGCGATGT GCTCTCTTCG CCTATTTCGA GCCAAATACC CGTTATTCAA GAAAATGACA ACCTTGAGCT AACTGCTACG CCAGCCAACA ACGTTTCCTT TATTGCGATC AACACTGAAA CCACCGCACT TAGTGATGCT CGCGTCCGCC AAGCACTTAA CTTAGCGATT AACCGTCAGA ACATTTTAGA TTCGGTTTAC TACGGAACTG GCTCGCAAGC TTATACATTG CTACCGCCTA ATTCATGGGC CTATCAAAAG GACAGCGTAA AAATTCGTTA TGACCGTAAC TATGCATTAG CACTACTCCG TGATGCTGGC TATGAAGACG GTCTAGAGCT GACCATGTGG GTACCACTTG AACCACGCGC CTTTAACCCA AGTCCTCGCA AGACCGCGGA GCTAATCCAA GCGAATTTTG CCGATATTGG GGTTGAGTTA ACGTTGCTAA CCGATGATAG ATTCGAACGT GTGGATTTAG AGAACATCAA CGACATCGAT TTACTTTTAA CTGGTTGGAT TGGTGATACC GGGGACCCTG ACAACTTTTT CCGCCCGTTA TTATCTTGTG AGTCTGATCG CGTTGGCCTC AACGTATCGA TGTGGTGTAA CGATGATTTC GATTTCTTAC TCGATTTGGC ATTGGAAACT CAAGAACCGC GTTACCGTCT GAACCTATAT CGCCAAGCGC AGAACATTTT AAATCAAGAA TTCCCGGTAA TTCCTCTGGC ACATGGTGTG CAATTCCGTG TTCACGACAA ATCACTGACA GGCTTCAAAT CAAGCCCTTT CAATGCCCAA CCGTTTGATA GAGTTGAGAG AATTCACTGA
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Protein sequence | MNAFIRLSLS LIGISLLTAC GDEIDHNDIR KAGFVFCGQG KPTTFNPQLI DSGITAEALS PQLYDTLLTL DPKSHQPVAN IAESWSVNES GTEYTFKLKR NVQFQTTSWF TPTRPLNAKD VVFSFKRIID VDHPFHQVGG GFYPWFAGLD FQNLLQDVTA IDEHTVRFTL SQPNFSFLAN IATSHAVILS AEYGQQLAAK DHKEEIDQLP IGTGPYQLKE YQVNDLIRLE RHSNYWKSPA KMEQVVFDIS HRGTGTLAKL LRNECDVLSS PISSQIPVIQ ENDNLELTAT PANNVSFIAI NTETTALSDA RVRQALNLAI NRQNILDSVY YGTGSQAYTL LPPNSWAYQK DSVKIRYDRN YALALLRDAG YEDGLELTMW VPLEPRAFNP SPRKTAELIQ ANFADIGVEL TLLTDDRFER VDLENINDID LLLTGWIGDT GDPDNFFRPL LSCESDRVGL NVSMWCNDDF DFLLDLALET QEPRYRLNLY RQAQNILNQE FPVIPLAHGV QFRVHDKSLT GFKSSPFNAQ PFDRVERIH
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