| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003814 |
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| Symbol | |
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| ID | 8557549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2444180 |
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| End bp | 2444851 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646406911 |
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| Product | phage shock protein A |
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| Protein accession | YP_003286439 |
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| Protein GI | 262394585 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.968962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TTTCTCGATT TGCAGATATC GTTAACTCAA ACATCAGTGC ATTGCTGGAC
AAGGCGGAAG ATCCTGAAAA AATGATCCGT CTTATCATTC AAGAAATGGA AGACACACTT
GTTGAAGTGC GTACTAACTC GGCTAAAGCG ATTGCAGACA AAAAAGAGTT GGCTCGTAAA
GTTGAAACGT TAGAAGAGCA AATTGGCGAA TGGAGCCAAA AAGCGAGCCT AGCGTTGGTC
AAACAGCGTG AAGATTTGGC TCGTGCAGCG TTAATTGAAA AGCAAAAGCT TGAGCAAGTG
ATAAAAGGTC TTCACACTGA GCAGACGTTA GTAGAAGAAA CGATCGACAA GCTTACAGGC
GAGATCGGTA AGTTAGAAAG CAAAATTGCA GAAACGCGTG CAAAACAGCA AGCACTAGCA
ATTCGTAACC AAACAGCCTC TAACCGTCGT GATGTGCAAA AACACCTGCA CACTAGCCGT
ACTAATGAAG CGATGGCAAA GTTTGAGCAG TACTCGCGTA AAGTGGATGA AATGGAAGCG
GAAGCAGATT TGTACGCACA AACTGGTAAT GCAAAATCGC TAGAGCAAGA GTTTGCAGAG
CTTCAAGCTC AAGACGAAAT CGAAAAAGAG TTGGCAAAAC TGAAAGAACA GATGTCATCG
AAAGATAAAT AA
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| Protein sequence | MGIFSRFADI VNSNISALLD KAEDPEKMIR LIIQEMEDTL VEVRTNSAKA IADKKELARK
VETLEEQIGE WSQKASLALV KQREDLARAA LIEKQKLEQV IKGLHTEQTL VEETIDKLTG
EIGKLESKIA ETRAKQQALA IRNQTASNRR DVQKHLHTSR TNEAMAKFEQ YSRKVDEMEA
EADLYAQTGN AKSLEQEFAE LQAQDEIEKE LAKLKEQMSS KDK
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