| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003810 |
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| Symbol | |
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| ID | 8557545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2441257 |
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| End bp | 2442354 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406907 |
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| Product | linker protein putative |
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| Protein accession | YP_003286435 |
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| Protein GI | 262394581 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAA TCATCTCTCT AGCGGCATTA TTTTCAACGT TTCTTCTTGT TGGTTGTGGC
GATAAGGCAC CAGAAAAAGC TCTTGAGACA CCGCGTGTAA GAGTTACCTC ATTAGCGGGA
AATCGGGTGG ATGACAACTT ATATTTCCCT GCGGTTGCGA ATGCAGCGGA TCGCTCTCAT
TTGAGTTTCC GAGTGGCAGG AGAAGTCAGC CGCATCATGG TAAAAGAGGG CGATAAAGTC
ACGAAGGGTG ATGTTATCGC AACGTTGGAC CCTACGGACT ATGAGTTGGA TGTAGATAAT
GCGAGTGCGC GTTTTTCTGT TGTTGACAGT CAGTATCGCC GTTCACGTCC TTTGGTTGAT
AAAGGCCTAT TAGCTAAGTC TCAGTTTGAT GAAATTGCAG CACAACGACA AATCGCTCTG
GCTGAGCTTA AGTTAGCGAA ACTCCGTTTA TCGTTTACTG CCTTAAAGGC GCCTGTGGAT
GGGATCATTT CGCGAGTTAA TATCGAGCAA TTCGAAAATG TCCAAGTCGG ACAGCATATC
GTCAATATTC ATAGTTTGGA GCGAGTTGAG GTGCTGATTC AACTTCCAGA CCGGCTCTAT
GTTAACCAAC CGCCAACGGA AGAAAGACTT ACCGCGATAA AGGCATTGGT GCGCGTGCCT
AGTGGTAACG AGTACAACGC GACCGTGAAA GAATTTACGA CTGAGCCAGA CCCAACAACA
GGCACGTTTA CCGTCACATT ATCGCTTCCT ATGCCGGAAG AAGAATACAT CCTAGATGGG
ATGGCCGTTG AGGTGACCTC CAAAGATAAG AACGTTGGCT TGGATCTCAA TTTAGGAATT
AATGTTCCTA TTGAAGCCAT TTTCAATGCG GACGGTGACG AGCTGGGGCG CGAAAACAAA
TTTGTTTGGG TACTGAATGA TGACAATACG GTATCGCGCA GACAGGTTCG AGCAGGTAAA
GCATCTAAAA CGTCCATTCA AATCCTTGAT GGTCTCATGC TCAAAGACAA AGTTGTGATT
GCCGGTGTTT CTCGGTTAAG GGATGGCATG AAAGTGGAAG TGATACAGGA AATGGCTACG
CAGGAGGCCG GTCTATGA
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| Protein sequence | MKGIISLAAL FSTFLLVGCG DKAPEKALET PRVRVTSLAG NRVDDNLYFP AVANAADRSH
LSFRVAGEVS RIMVKEGDKV TKGDVIATLD PTDYELDVDN ASARFSVVDS QYRRSRPLVD
KGLLAKSQFD EIAAQRQIAL AELKLAKLRL SFTALKAPVD GIISRVNIEQ FENVQVGQHI
VNIHSLERVE VLIQLPDRLY VNQPPTEERL TAIKALVRVP SGNEYNATVK EFTTEPDPTT
GTFTVTLSLP MPEEEYILDG MAVEVTSKDK NVGLDLNLGI NVPIEAIFNA DGDELGRENK
FVWVLNDDNT VSRRQVRAGK ASKTSIQILD GLMLKDKVVI AGVSRLRDGM KVEVIQEMAT
QEAGL
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