Gene VEA_003795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003795 
Symbol 
ID8557530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp2422356 
End bp2423003 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content48% 
IMG OID646406892 
ProductABC transporter ATP-binding protein YnjD 
Protein accessionYP_003286420 
Protein GI262394566 
COG category[R] General function prediction only 
COG ID[COG4136] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.260777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTT GTCTCGAAAA CCTCGCCATC CGTAAAACCA ATGGCGACAC GCTTTTTTCA 
GCGTTCAACA TGACCGTAGA GAAAGGTGAA ATTGTTACTC TGATGGGACC AAGTGGTTGT 
GGTAAATCCA CTTTGTTGGA TGCTATTGCT GGGCACCTAT CCGCCGAGTT CAACTACTCT 
GGATCCATTA CGCTTGATAA CGAAAAGTTG GATGCCCTCC CTGCCCATAA GCGTCAGGTC 
GGTATTCTAT TCCAAGACGA TTTGCTCTTC CCTCACTTGA CGGTGTGGGA GAACCTTGCC 
TTCGCGCTAC CAAACTCAAT CAAAGGTGAG GAGCGTAAAG CACACGCCAT GCAAGCACTG 
AAGAACATTG CATTGACCAA ACTTGCCGAA TCCTTCCCAG ATCAAATCTC CGGAGGACAA 
CGCGCCCGTA TCTCATTGAC TCGTATGCTG CTGGCAAAGC CGAGAGTTGC GCTACTTGAT 
GAACCCTATA GCAAGTTGGA TAAAGACCTG CGTGTACAAT TTCGCAATTG GGTGGTCGAA 
CAATTACATC AAGCGAACAT CCCTACTTTG ATGGTAACGC ACGATGAGGA TGATATTCCT 
GATGGCAGCC GCTGCCTAAA TTGGCCGTGG GAGACAAACC ATGCTTGA
 
Protein sequence
MSLCLENLAI RKTNGDTLFS AFNMTVEKGE IVTLMGPSGC GKSTLLDAIA GHLSAEFNYS 
GSITLDNEKL DALPAHKRQV GILFQDDLLF PHLTVWENLA FALPNSIKGE ERKAHAMQAL 
KNIALTKLAE SFPDQISGGQ RARISLTRML LAKPRVALLD EPYSKLDKDL RVQFRNWVVE 
QLHQANIPTL MVTHDEDDIP DGSRCLNWPW ETNHA