| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003782 |
|---|
| Symbol | |
|---|
| ID | 8557517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2409395 |
|---|
| End bp | 2411146 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646406879 |
|---|
| Product | helicase-related protein |
|---|
| Protein accession | YP_003286407 |
|---|
| Protein GI | 262394553 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000188444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACACAC TTCGCCCTTA TCAAGCCGAC TCGGTTAAAG CAGTCATTCA TTACTTTCGT
AAACACTCGA CACCAGCAGT GATCGTACTG CCTACTGGTG CCGGAAAAAG CTTGGTGATC
GCAGAGCTTG CTCGCCTTGC GAAAGGGAGA GTGTTAGTTC TCGCTCACGT TAAAGAGCTG
GTCGAGCAAA ACCACGCGAA GTATGAAGGT TATGGTTTAA AAGGTTCTAT CTTCTCAGCG
GGATTAGGAC GAAAAGAAAC TGATCAGCAA GTCGTGTTTG CTTCGGTTCA ATCGGTCGTA
CGTAACTTAG ATTCGTTCAA AAACCAGTTT TCTCTGCTCG TTATTGATGA GTGCCATCGT
GTGCCGGATG ACAAAAACAG CAGCTACCAA AAAGTTATTA CTCACTTACG AGAACTGAAC
CCAGGCATTA AGGTGCTGGG ACTAACTGCA ACGCCCTATC GTTTAGGAAT GGGCTGGATT
TATCAGTACC ATACCCGAGG TCAAGTACGC ACCGAAGAGC CGCGATTCTT CCGCGATTGT
ATTTTCGAAC TGCCGATCCG TTACTTGCTC GACGAAAACT TCCTCACTCC GGCACGAATG
ATGGACGCGC CTGTTTTGTC TTACGACTTC TCGCAACTGA AACCCGCAAA CACCGGACGC
TACAAAGAAG CAGAAATGGA CATGGTGATC GATAAAGCCA AGCGCGCCAC TCCGCAAATT
GTTGAGCAAA TCATGCAATA TGCGAGAGAA CGTCAAGGTG TCATGATCTT CGCCGCGACT
GTCCGACACG CACAAGAGAT CCACAGTTTA CTGCCAGAAG GCGAAACTGA AATCGTCATT
GGTGATACAC CTACGCCGGA ACGTGACGCG ATCATCCAAG CGTTCAAGAA TCGTCAAATA
AAATATTTGG TCAATGTTTC GGTACTGACT ACCGGGTTTG ATGCGCCGCA TGTCGATTTA
ATCGCGATTT TGCGACCAAC AGAGTCAGTC AGTCTATACC AGCAGATTGT AGGGCGAGGA
TTACGCTTAT CAGACGGAAA ATCAGAATGT TTAGTGCTTG ATTACGCAGG CAACAGCTAC
GATTTATACC AACCTGAAGT CGGTGATCCC AAACCAGACT CTGATAGTGA AATTATCACG
ATTCCCTGCC CGGCTTGCGG ATTCAATAAC AACTTCTGGG GTAAGTTGGA TAGTAACGGT
TTCTTGGTTG AACACTTTGG CAGACGTTGC CAGGGTTACT TTGAAGATGA AGACACAGGC
GAGCGTGAAC ACTGTGGCTA CCGTTTTCGT GCCAAATACT GTGGTGAATG TGGTGCCGAC
AACGATATTG CTGCGCGCAT TTGTCATGAG TGTGACGCAA CGCTTGTTGA TCCAGATAAA
AAATTAAAAG AAGCCCTTAA TCTGAAGGAT GCATTAATCT TTGAATGCAC AGAAATGGAC
CTGTCAGTAT TCAAGTCCAG TGATGGTAAA TCTCAACTCA AGGTGACATA TTCTGGCGAA
CCATACCAAG GCGAAGGCAA TGCGTTAGTT CATGAGTTTT GGTCATTGAG TACCAAAAAA
CAAAAACAAA CGTTTAAAGA CCAATTTGTG CGCCCTCACT TGGCAGACAA GCATCGCCCT
TTTGAAGAGG CTTCACCGAC ACGTGTTGTT GCCAATCAAC ATCGTTTCCG TTTACCTCAG
TTTGTTATTG CAAGGAAATC CGGTCGCTTT TGGAAATTGC GAGACAAAAT TTTTGAAGAC
GAGTTGAAAT AA
|
|---|
| Protein sequence | MYTLRPYQAD SVKAVIHYFR KHSTPAVIVL PTGAGKSLVI AELARLAKGR VLVLAHVKEL
VEQNHAKYEG YGLKGSIFSA GLGRKETDQQ VVFASVQSVV RNLDSFKNQF SLLVIDECHR
VPDDKNSSYQ KVITHLRELN PGIKVLGLTA TPYRLGMGWI YQYHTRGQVR TEEPRFFRDC
IFELPIRYLL DENFLTPARM MDAPVLSYDF SQLKPANTGR YKEAEMDMVI DKAKRATPQI
VEQIMQYARE RQGVMIFAAT VRHAQEIHSL LPEGETEIVI GDTPTPERDA IIQAFKNRQI
KYLVNVSVLT TGFDAPHVDL IAILRPTESV SLYQQIVGRG LRLSDGKSEC LVLDYAGNSY
DLYQPEVGDP KPDSDSEIIT IPCPACGFNN NFWGKLDSNG FLVEHFGRRC QGYFEDEDTG
EREHCGYRFR AKYCGECGAD NDIAARICHE CDATLVDPDK KLKEALNLKD ALIFECTEMD
LSVFKSSDGK SQLKVTYSGE PYQGEGNALV HEFWSLSTKK QKQTFKDQFV RPHLADKHRP
FEEASPTRVV ANQHRFRLPQ FVIARKSGRF WKLRDKIFED ELK
|
|---|
| |