| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003780 |
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| Symbol | |
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| ID | 8557515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2406943 |
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| End bp | 2408145 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406877 |
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| Product | permease |
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| Protein accession | YP_003286405 |
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| Protein GI | 262394551 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.142338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAA AAGCTCAAAG CGCTCCGCAA TCCCAAATCA GTTTTCTATT GTTTCTTGTA
TTAGGAGCGA TTGGTGCTTT GACGCCTTTG GCGATCGACA TGTATTTGCC TGCAATGCCA
ACCATCGCGA AAGATTTGGG TGTTGCGCCT GGTGCGGTTC AGATTACGTT GACGGCTTAT
ACGGCAGGTT TTGCGATTGG CCAGTTAATT CACGGGCCGC TTGCCGATAG TTTTGGCCGT
AGACCTGTAC TGATTTTGGG TGTGCTTTTC TTTGGATTAG CGGCGGTAGT GAGTGCGACC
ACAAACGGCA TTGATGCATT GACTTATGTG CGAACAGCAC AAGGTTTTGC TGGCGCGGCA
GCGGCGGTCA TTATCCAAGC CGTCGTGCGT GACATGTTTG ACCGTGAAGA CTTTGCCCGT
GCAATGTCCT TCGTCACTTT AGTTATCACA ATGGCACCCT TGGTCGCGCC TATGATAGGT
GGTCACCTAG CGATCTGGTT TGGTTGGCGT TCGATCTTTT GGGTGTTAGC CATTTTCGCT
GTGGTGGTAA TTCTACTGGT ACTTTGGAAA ATTCCAGAGA CGCTGAAACC AGAAAATCGT
CAGCCGCTTC GTTTTCGCAC TACGATGAGA AACTACGCCA GATTATGCTC CAACCCTGAA
GCGATAGGTT TGATGCTTTC TGGAGCGTTT TCATTTTCCG GAATGTTTGC ATTTCTGACC
GCGGGTTCGT TTGTTTATAT TGATTTATAT GGTGTTCGAC CAGACCACTT TGGTTATTTA
TTTGGTTTGA ACATTGTTGC GATGATCATC ATGACCAGTA TTAATGGTCG CTTGGTGAAG
AAAGTTGGCT CTCATGCCAT GCTTCGTTTT GGGTTGTTCG TGCAACTTTT GGCGGGGATT
GGTTTATTCG TAAGTTGGTT AATGGACTTC GGATTATGGG GTATCGTACC TTTTGTTGTG
CTTTTTATCG GTACATTGTC GACGATAGGT AGTAACGCGA TGGCGCTGCT TTTAAGTGGC
TACCCATCAA TGGCGGGTAC AGCTTCGTCT CTGGCGGGGA CGTTAAGATT CGGTATCGGC
TCATTGGTTG GCGCGCTGGT GGCATCACTA CCAGGTAATG TGGCGTGGCC GATGATCATT
GTGATGTTTG CTTGTTCTGT GCTTTCAGCA CTGTTTTATT GGACTTTAGG AAGAAAGGCG
TAA
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| Protein sequence | MTEKAQSAPQ SQISFLLFLV LGAIGALTPL AIDMYLPAMP TIAKDLGVAP GAVQITLTAY
TAGFAIGQLI HGPLADSFGR RPVLILGVLF FGLAAVVSAT TNGIDALTYV RTAQGFAGAA
AAVIIQAVVR DMFDREDFAR AMSFVTLVIT MAPLVAPMIG GHLAIWFGWR SIFWVLAIFA
VVVILLVLWK IPETLKPENR QPLRFRTTMR NYARLCSNPE AIGLMLSGAF SFSGMFAFLT
AGSFVYIDLY GVRPDHFGYL FGLNIVAMII MTSINGRLVK KVGSHAMLRF GLFVQLLAGI
GLFVSWLMDF GLWGIVPFVV LFIGTLSTIG SNAMALLLSG YPSMAGTASS LAGTLRFGIG
SLVGALVASL PGNVAWPMII VMFACSVLSA LFYWTLGRKA
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