Gene VEA_003770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003770 
Symbol 
ID8557505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2395458 
End bp2396129 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content46% 
IMG OID646406867 
ProductABC-type antimicrobial peptide transport system ATPase component 
Protein accessionYP_003286395 
Protein GI262394541 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAC TGTCAGACCT ATGTAAAGGC TATGTAGACG GGGGAGAATT TCACCCTGTA 
TTACAAGGGG CAGAATTAAC ATTACAGCAA GGTGACCAAG TCGCTCTGAT GGGAGAAAGT 
GGTTCGGGTA AAAGTACTTT GCTGAACTTA ATTGCCGGAC TGGATACTGC AGACTCTGGT 
GAAGTTCAGT TTCCAAATTT TGCCATGCAT GATGCGCCAG AGCATTTGAG AACCCTTTAT 
CGCCGCAACA ATATTGGTAA TATCTTCCAA CAGTTCAACC TGCTTCCTAC GCTCAATATT 
GCCGACAATA TTCGTTTTTG TCGTCAGTTA AAAGGTTTGC CAGAAGATAA AGAGTTGTGG 
CGTCAAATTC TTTCTGCTCT GGATTTAATG CCTCTGCTAG GGCGCTACCC GGAAGAAGCA 
TCTGGTGGTC AGCAACAACG TGCTGCTATT GCTCGTGCAC TCTATATGGA ACCTAAAATC 
CTACTCGCTG ATGAGCCAAC TGGTAGCCTA GACGAGCGAA ACGCAGAAGC GGTAATGCGC 
TTATTGACGA GTCTCGCTCG CCAGCTGGAG TGTACTTTGC TGTTAGTGAC GCACAGTGAA 
AAAGTGGCGG CCCATATGGA AGGTAAGATT CGACTTCAAG GAGGGCAACT GCATGTTATG 
GCCCGTAGTT AA
 
Protein sequence
MLKLSDLCKG YVDGGEFHPV LQGAELTLQQ GDQVALMGES GSGKSTLLNL IAGLDTADSG 
EVQFPNFAMH DAPEHLRTLY RRNNIGNIFQ QFNLLPTLNI ADNIRFCRQL KGLPEDKELW 
RQILSALDLM PLLGRYPEEA SGGQQQRAAI ARALYMEPKI LLADEPTGSL DERNAEAVMR 
LLTSLARQLE CTLLLVTHSE KVAAHMEGKI RLQGGQLHVM ARS