Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003763 |
Symbol | |
ID | 8557498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2383718 |
End bp | 2385253 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646406860 |
Product | TrkA Potassium channel-family protein |
Protein accession | YP_003286388 |
Protein GI | 262394534 |
COG category | [R] General function prediction only |
COG ID | [COG2985] Predicted permease |
TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000044665 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCACC TTGGCTTCTC ATTCAATGCA GAAGCATTAA CCATTGGCTT TATGCTGTTT ATCTATTGCG TTGGCATTGA AGCTGGACCA AACTTTTTTG GCATATTCTT CAGAGATGGT AAGCATTACT TTATTTTAAG TATGACCGTT CTCGTGTCCG CAGTCAGCTT AACGTATGGC TTGAGCCACT ATTTCGGCCT CGACTTTGGC TTGTCAGCCG GTATGATGGC TGGCGCGTTG ACAGCAACAC CAGTACTGGT TGGTGCACAA GACGCTCTAA ACTCCGGCCT TGCTACTATA CCGCGCAATA TGGATTTTTC TTTGGTATTA GAAAATCTAT CTGTAGGTTA CGCGATGGCT TATCTGGTGG GCTTAATTAG CATGATCATG TTCGCGAAGC TGTTGCCAAA ACTGCAGAAG CAGAACCTGT CTGATTCTGC GCAGCAAATT GCTCAAGAAC GTGGCCTTGG AAATTCAAGC CAAAGAAAAG TGTACTTACC GATTATTCGT GCTTACCGAG TCGGCCCAGA ATTGATTGAC TGGACTGACG GCAAGAACTT GCGTGAACTG GGTATTTATC GTCAAACTGG CTGTTACATT GAACGAATCC GCCGCAATGG TATTCTCGCC CATCCAGATG GTGATGCCAT TTTGCAAGAG GGTGATGAAA TTGCACTGGT TGGCTTCCCT GATAGCCATG CTCGCTTGGA TCCTAGCTTC CGCAACGGAA AAGAAGTATT TGATCGTAAC TTGCTTGATT TGCGCATCGT TGAAGAAGAA ATTGTCGTAA AAAGTGACGC TATCGCAGGC AAGCGTTTAT CTGATTTAAA CTTATCTGAG TTTGGCTGTT TCTTAAACCG CGTGGTACGT GCGCAAATAG AAATGCCGAT GGACTTAGAC ATTGTGCTCG CTAAAGGTGA CGTCCTTCAG GTGAGCGGCG AGAAAAGCCG AGTACATGGA CTCGCGGAAA AAATCGGTTT CATCTCGATC CACAGTCAAA TGGCCGATTT ACTCGCTTTT TGCAGCTTCT TTATTTTGGG TATTCTGTTT GGCCTCATCA CGATGACATT CGGCCAGGTT TCGTTCAGCT TGGGTAACGC GGTAGGTCTT TTGTTATCTG GTATTACACT TGGTTTCTTA CGAGCAAATC ACCCTACTTT CGGCTATGTC CCGCAGGGGG CGCTGAATAT GGTCAAAGAT TTGGGTTTGA TGTTCTTTAT GGTGGGAATA GGTCTAAGTG CAGGCGGAAA GATGTTCGAG CACTTGACTC AAGTTGGTCC AAAAGTGATT GGTTTAGCAT TCATTGTTAG TGTTGTGCCT GTGGTATTGG CCTATTTAGT GGGCGCACAC ATACTCAAGA TGAACCGTGC CCTGCTCTTC GGTGCCATTA TTGGTGCCCG AACTTGTGCC CCAGCTATGG ATGTCGTCAA CGACTACGCT AAATCCACCA TCCCAGCTCT TGGCTATGCG GGTACCTATG CGATTGCCAA TATTCTGATG ACGTTGGCAG GTACAATCCT GATAATATTA AGTTAA
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Protein sequence | MGHLGFSFNA EALTIGFMLF IYCVGIEAGP NFFGIFFRDG KHYFILSMTV LVSAVSLTYG LSHYFGLDFG LSAGMMAGAL TATPVLVGAQ DALNSGLATI PRNMDFSLVL ENLSVGYAMA YLVGLISMIM FAKLLPKLQK QNLSDSAQQI AQERGLGNSS QRKVYLPIIR AYRVGPELID WTDGKNLREL GIYRQTGCYI ERIRRNGILA HPDGDAILQE GDEIALVGFP DSHARLDPSF RNGKEVFDRN LLDLRIVEEE IVVKSDAIAG KRLSDLNLSE FGCFLNRVVR AQIEMPMDLD IVLAKGDVLQ VSGEKSRVHG LAEKIGFISI HSQMADLLAF CSFFILGILF GLITMTFGQV SFSLGNAVGL LLSGITLGFL RANHPTFGYV PQGALNMVKD LGLMFFMVGI GLSAGGKMFE HLTQVGPKVI GLAFIVSVVP VVLAYLVGAH ILKMNRALLF GAIIGARTCA PAMDVVNDYA KSTIPALGYA GTYAIANILM TLAGTILIIL S
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