| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003759 |
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| Symbol | |
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| ID | 8557494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2378618 |
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| End bp | 2380264 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406856 |
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| Product | glutamate decarboxylase eukaryotic type |
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| Protein accession | YP_003286384 |
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| Protein GI | 262394530 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAGG AACAAAAAAC CGCTGACGTT AGCTTTGAGA GCTTGCTAAA GATCTTCACT
GTCCCAGAAG GTCCTGACTC AACGTTAACC AAAATTGACG AGAGCCTCTC GCGAAATCTA
AATCAATTTC TTCGTGAACA CATCGTGGCA GAAGAAAAGC CTTTACGCGA AATCGAAAAA
GACTTTTCTT CTGCTCAGAT TCCTGAGCAG CCAGAGTTCG TGTCAGATCA TACAGAACAC
TTACTCGACA CTTTGGTGTC GCACTCCGTT CACACTTCTT CACCAAGCTT CATTGGTCAT
ATGACATCGG CGCTGCCTTA TTTCTTGATG CCACTGTCAA AGATCATGAT CGCCTTAAAC
CAAAACCTGG TAAAGATAGA GACTTCTAAA GCCTTTACCC CGCTTGAACG TCAAGTTTTG
GGCATGCTAC ATCGCTTGAT CTATGGTCAG AGCGATACGT TTTACGATCA GTGGATGCAT
AGCGCAAACC ACTCATTGGG CGCATTTTGC TCCGGCGGTA CCATTGCCAA TATCACTGCA
CTTTGGGTAG CACGTAACAA GGCGTTAAGA GCCAATGGTT CATTTAAAGG CGTTGAGAAA
GAAGGCCTAT TTAAAGCCAT GAAGCATTAT GGCTACGATG GCTTAGCGGT ATTGGTGTCT
GAGCGTGGTC ACTACTCCCT TAAGAAAGCA GCCGATGTAC TAGGTCTAGG TCAAGAAGGC
TTGGTTGCGG TTAAAACGGA TGCCAACAAC CGTATTATTG TCGACGACCT TAAAGCGAAA
ATTGTTGAAC TAGAGAAACA AAACATCAAG CCTATTGCTG TTATTGGTGT AGCTGGTACA
ACAGAGACAG GTAATGTCGA CCCGCTACCT GAAATCGCAG AAGTCTGCCA AGCTCACGGT
TGTCATTTCC ATGTGGATGC CGCATGGGGT GGCGCAACAC TTATGTCTAA TCACCACCGT
CACCTTCTTA ACGGTGTGGA AATGGCAGAC TCAGTAACCA TTGATGCGCA CAAGCAACTC
TACATCCCGA TGGGCGCTGG TATGGTTCTG TTCAAAGACC CTGACGCAAT GAAATCCATA
GAGCATCACG CTCAATATAT CTTGCGTAAA GGCTCAAAAG ACCTAGGCAG CCATACATTA
GAAGGCTCTC GTTCGGGCAT GGCAATGTTA GTCTATGCCG CAATGCACAT CATCAGCCGC
CCTGGCTATG AGCTGCTGAT AGACCAAAGC ATTGAAAAAG CTCGCTACTT TGCGGATTTA
ATCAAGCAAC AAGATGATTT CGAATTGGTT TCTGAACCAG AGCTTTGTCT GCTCACATAC
CGCTACTTGC CGCCATTCAT CCGTGAGGCA TTAGCAAAAG CGGAAGGTTC ACAAAAAGAA
CAACTGAATG AACTGATTAA TGAATTAACA CAGTTTATTC AAAAGCGTCA GCGTGAAACG
GGCAAATCGT TTGTTTCACG TACAAGACTG AACCCAGACC AATGGCAGCG CATGAACACG
ATTGTGTTCC GAGTGGTTTT GGCGAATCCG CTGACGACCA AAGAAATTTT GAGTTCGGTG
CTTGATGAAC AGCGTGAAAT CGCCAAGCAA GCACCAAATT TGATGGAAAG AATTCAGCAG
GTGGTCACTG ATATCCAATC GTCTTAA
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| Protein sequence | MVKEQKTADV SFESLLKIFT VPEGPDSTLT KIDESLSRNL NQFLREHIVA EEKPLREIEK
DFSSAQIPEQ PEFVSDHTEH LLDTLVSHSV HTSSPSFIGH MTSALPYFLM PLSKIMIALN
QNLVKIETSK AFTPLERQVL GMLHRLIYGQ SDTFYDQWMH SANHSLGAFC SGGTIANITA
LWVARNKALR ANGSFKGVEK EGLFKAMKHY GYDGLAVLVS ERGHYSLKKA ADVLGLGQEG
LVAVKTDANN RIIVDDLKAK IVELEKQNIK PIAVIGVAGT TETGNVDPLP EIAEVCQAHG
CHFHVDAAWG GATLMSNHHR HLLNGVEMAD SVTIDAHKQL YIPMGAGMVL FKDPDAMKSI
EHHAQYILRK GSKDLGSHTL EGSRSGMAML VYAAMHIISR PGYELLIDQS IEKARYFADL
IKQQDDFELV SEPELCLLTY RYLPPFIREA LAKAEGSQKE QLNELINELT QFIQKRQRET
GKSFVSRTRL NPDQWQRMNT IVFRVVLANP LTTKEILSSV LDEQREIAKQ APNLMERIQQ
VVTDIQSS
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