Gene VEA_003753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003753 
Symbol 
ID8557488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2374763 
End bp2375350 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content40% 
IMG OID646406850 
ProductDNA transformation protein TfoX 
Protein accessionYP_003286378 
Protein GI262394524 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATGA CAGACCAAGC TTTTTTTAAA TATGTACGCA ACTTTAGTGA GTATCAAAAA 
CGTTCTATGT TCGGTGGTAT CGGTTTATTC ACCGATGATG CTATGTTTGC GCTTGTCAGC
AATGATTGCT GCTACTTACG TGGTGGTAAT GGATTGGACG AAGTGTTTAC TCAGCTGAAT
TGCGAAAAAT ATAAGCACGT CAAAAAACAG ACGACGGCAA CCGTAAATTA TTATGATGTA
ACAGATTTGT TTGAATCCGG ATATGCAGGA CTCGATGAAC TGGTACAAAA ATCAATTGAA
TACTCAATTA AGGAACGAAA ATATCAAAAG TCTTCTGCCA GTAGACGTTT GAGAGATCTG
CCAAATATGC AGTTAACTCT TGAGCGAATG GTCAAGAAAG CAGGTGTTGA TGACGTAGAA
ACCTTTTTAG AACTTGGACC TGTAAAAGTC TTCAACAAAG TTAAAGTGGC TTATGGCAAT
GACGTTGATG TTAAGTTGCT TTGGAAATTC GCTGGTGCCA CTGACGGTGT TCATTGGAAA
CTGATTCAAG AGCCGCGTAA AAAGCAGTTA CTGGCGCTGT GTGAGTAA
 
Protein sequence
MDMTDQAFFK YVRNFSEYQK RSMFGGIGLF TDDAMFALVS NDCCYLRGGN GLDEVFTQLN 
CEKYKHVKKQ TTATVNYYDV TDLFESGYAG LDELVQKSIE YSIKERKYQK SSASRRLRDL
PNMQLTLERM VKKAGVDDVE TFLELGPVKV FNKVKVAYGN DVDVKLLWKF AGATDGVHWK
LIQEPRKKQL LALCE