Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003753 |
Symbol | |
ID | 8557488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2374763 |
End bp | 2375350 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 646406850 |
Product | DNA transformation protein TfoX |
Protein accession | YP_003286378 |
Protein GI | 262394524 |
COG category | [K] Transcription |
COG ID | [COG3070] Regulator of competence-specific genes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACATGA CAGACCAAGC TTTTTTTAAA TATGTACGCA ACTTTAGTGA GTATCAAAAA CGTTCTATGT TCGGTGGTAT CGGTTTATTC ACCGATGATG CTATGTTTGC GCTTGTCAGC AATGATTGCT GCTACTTACG TGGTGGTAAT GGATTGGACG AAGTGTTTAC TCAGCTGAAT TGCGAAAAAT ATAAGCACGT CAAAAAACAG ACGACGGCAA CCGTAAATTA TTATGATGTA ACAGATTTGT TTGAATCCGG ATATGCAGGA CTCGATGAAC TGGTACAAAA ATCAATTGAA TACTCAATTA AGGAACGAAA ATATCAAAAG TCTTCTGCCA GTAGACGTTT GAGAGATCTG CCAAATATGC AGTTAACTCT TGAGCGAATG GTCAAGAAAG CAGGTGTTGA TGACGTAGAA ACCTTTTTAG AACTTGGACC TGTAAAAGTC TTCAACAAAG TTAAAGTGGC TTATGGCAAT GACGTTGATG TTAAGTTGCT TTGGAAATTC GCTGGTGCCA CTGACGGTGT TCATTGGAAA CTGATTCAAG AGCCGCGTAA AAAGCAGTTA CTGGCGCTGT GTGAGTAA
|
Protein sequence | MDMTDQAFFK YVRNFSEYQK RSMFGGIGLF TDDAMFALVS NDCCYLRGGN GLDEVFTQLN CEKYKHVKKQ TTATVNYYDV TDLFESGYAG LDELVQKSIE YSIKERKYQK SSASRRLRDL PNMQLTLERM VKKAGVDDVE TFLELGPVKV FNKVKVAYGN DVDVKLLWKF AGATDGVHWK LIQEPRKKQL LALCE
|
| |