| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003746 |
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| Symbol | |
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| ID | 8557481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2365379 |
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| End bp | 2367100 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406843 |
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| Product | transport ATP-binding protein CydC |
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| Protein accession | YP_003286371 |
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| Protein GI | 262394517 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGATT TACTCCCTTA TCTAAAACTC TATAAGAAAC ATTGGTTTGG TCTTTCTCTA
GGTATGCTAT TGGCATTTCT GACCTTAGCT GCATCTATTG GCTTATTAAC GCTATCGGGT
TGGTTTATTT CAGCCGCTGC GGTGGCAGGC TTGACGGTAG CTCGTGAGAC CTTCAACTAC
ATGTTACCAG GTGCTGGGGT ACGCGGCGCT GCAATGGCTC GAACCGCAGG TCGATGGGGA
GAACGTGTCG TTAGCCACAA TGCAACGTTC AAACTGCTTA CCGATCTACG TATCTTCTTC
TTTAAGAAAC TTGCACCACT GATTCCGGGT CGTGTCTCTA CGATGCGTGA TGCTGATCTG
CTCAACCGCC TAGTGGCGGA CGTAGATGCG ATGGATCACG TTTATCTTCG ACTTATCAGC
CCTGTCGTGA TTGGTATTTT TGGGATACTA AGTTTAACGG CTGTCCTGGC ATTTTTTGAC
TGGCATCTCG CCCTGCTGCT TGGTTCGATT CTTACCGTCA TGTTGTTTGT ATGGCCGGTG
CTGTTCTATA AACTGGGTAA AAACAATGGC GAGAATCTCA CTCATCATAA AGCGCAATTG
CGAGTGGCGA CTCTGGACTG GCTTCAAGGC TACAGCGAAC TGAGTATCTT TGGAGCAGAA
GAGCGTTATC GCAATCTCAT TCTAGAGAAG CAAAAGCAGC TTTTGTCTAA TCAGTTTGTG
AACGCGAATT TAACGGGCAT GGCTTCAGGC CTGCTTATGC TTGTGAACGG TCTTACACTG
GTTGTGATGC TTTGGTTTGC TGCAGACGGC GTAGGAGGTC GTGCTCCTGA TCCTTGGATT
GCGTTGTTTG CATTTGCAAC GATGGCAAGT TTTGAAATTT TGATGCCTAT TGCGGGCGCG
TTCCAGTACC TGGGGCAAAC GTTGACTTCT GCTCGTCGTT TAAATGAAGT AATTTTGGCT
GAACCGGACG TTGTCTTCCC TGAGCAATCG AAACATAAAG GCACAACGTT AGACATTGAA
TTCGACAACA TTGACTTCAC TTACCCTGAC GGTCAGCAAA AGGTGCTGAA AGACTTGTCA
CTCTCACTAC CGTTGGGCAC TAAAACAGCC ATTGTAGGTC AAACAGGTTC AGGTAAATCA
ACACTCATTC AGCTTCTTTG TCGCTACTGG GATGTAAACC AAGGTGAAGT TCGAATCGGT
GGTACAAAGC TGCAAGATTG GAGCGAGTCT GACCTGCGAG AAGCAATGAC AGTGGTAAGT
CAACGCGTTG ATGTACTGAA TGGAACACTG CGTGACAACT TACTTATGGC CGCTCCAGAA
GCAAGTGATG AGCGACTGTC TGAGATTCTT CAAAAAGTCG AACTTGGTGG CCTTCTTGAG
GCTCCAGGGT TAGACGCTTG GTTAGGCGAC GGTGGTCGTC AGTTATCTGG TGGAGAGAAA
CGCCGAATCG GTATCGCTCG CGCATTGCTA CGTGATGCGC CAATCCTACT CTTGGATGAA
CCAACTGAAG GTCTCGATAA GCGTACGGAA CAGAAAGTGA TGGCGCTTTT CAATGAGCAC
TTTGCTAATA AGACAGTGAT ATTCATTACA CACCGACTAA TAGAATTAGA AAGCATGGAT
AGCATCTGTT TGATGGAACA AGGTGAGATC ATCGAACAAG GCGACCATCC AACGCTACTC
GCTCAGAAAG GTCGTTACTA CCAGCTATTA CAGTCTCTAT AA
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| Protein sequence | MRDLLPYLKL YKKHWFGLSL GMLLAFLTLA ASIGLLTLSG WFISAAAVAG LTVARETFNY
MLPGAGVRGA AMARTAGRWG ERVVSHNATF KLLTDLRIFF FKKLAPLIPG RVSTMRDADL
LNRLVADVDA MDHVYLRLIS PVVIGIFGIL SLTAVLAFFD WHLALLLGSI LTVMLFVWPV
LFYKLGKNNG ENLTHHKAQL RVATLDWLQG YSELSIFGAE ERYRNLILEK QKQLLSNQFV
NANLTGMASG LLMLVNGLTL VVMLWFAADG VGGRAPDPWI ALFAFATMAS FEILMPIAGA
FQYLGQTLTS ARRLNEVILA EPDVVFPEQS KHKGTTLDIE FDNIDFTYPD GQQKVLKDLS
LSLPLGTKTA IVGQTGSGKS TLIQLLCRYW DVNQGEVRIG GTKLQDWSES DLREAMTVVS
QRVDVLNGTL RDNLLMAAPE ASDERLSEIL QKVELGGLLE APGLDAWLGD GGRQLSGGEK
RRIGIARALL RDAPILLLDE PTEGLDKRTE QKVMALFNEH FANKTVIFIT HRLIELESMD
SICLMEQGEI IEQGDHPTLL AQKGRYYQLL QSL
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