Gene VEA_003729 details

Gene Information

• Locus tag: VEA_003729
• ID: 8557464
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2343889
• End bp: 2344557
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 646406826
• Product: outer membrane protein
• Protein accession: YP_003286354
• Protein GI: 262394500
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.113552
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAAGA TGCCTATTGC ACTAGCTCTA GTGCTAGCTC TTACTGGCTG TCAAGCCACT 
CAACGCCAAA ATGCAACAAC GGGTGAATAC GAAACTAACT CAACCACGCA AGGCGCGCTT 
ATTGGTGCTA TCGCTGGTGC AGCAATCGGT CTAGCAACGG GCGATGACGC TAAAGAACGT 
CGTCAGCATG CACTCATTGG TGCGGCCGCA GGCGGAGCGA CTGGCGCTGG CGTTGGTTAC 
TACTTTGACC AACAAGAAGC AGAATTGCGT CGCGCTTTGC TAAATTCTGG TGTACAAGTT 
CAGCGTGTTG GTGAGAACCA GCTTTTACTG CGTATGGAAA ATGGTATCGG CTTCTCTTCA 
AGCTCTTACC AGCTTGATGC TAGCATTCAT AATACGCTAC GCGGTGTTGC TCGCATCTTG 
GTTGAATACC CAGATACCAG CCTTGTTATC GACGGTTACA CTGATAGCAC GGGCAGTGAG 
TCATACAACC AAACGTTGTC TGAGCGTCGT GCAGAGTCCG TACGTCAATT CCTAGTATCT 
CAAAACGTTG CACCTGGTCG TGCAATTGCA CGTGGCTACG GCGAACGTAA CCCAATTTGC 
TCAAACCAAA CTTCTGAAGG TCGTGCGTGC AACCGTCGTG TTGAAATCCA GATCTTGCCA 
CTGAAGTAA 

 

Protein sequence

MKKMPIALAL VLALTGCQAT QRQNATTGEY ETNSTTQGAL IGAIAGAAIG LATGDDAKER 
RQHALIGAAA GGATGAGVGY YFDQQEAELR RALLNSGVQV QRVGENQLLL RMENGIGFSS 
SSYQLDASIH NTLRGVARIL VEYPDTSLVI DGYTDSTGSE SYNQTLSERR AESVRQFLVS 
QNVAPGRAIA RGYGERNPIC SNQTSEGRAC NRRVEIQILP LK