Gene VEA_003723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003723 
Symbol 
ID8557458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2335551 
End bp2337086 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content48% 
IMG OID646406820 
Producthistidine ammonia-lyase 
Protein accessionYP_003286348 
Protein GI262394494 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00913143 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATT TAACGCTAAA GCCAGGTCAT ATTAGCTTAA ACGAACTACG CCAAGTGAGC 
CGTTCACCAG TCAACCTTAC TTTGGATCCT GAAGCCATTC CGGCCATTGA AGAAAGCACG
CAAGTCGTGG ATCGTGTCAT CGCGGAAGAT CGAACGGTTT ACGGAATTAA CACTGGTTTT
GGTCTATTGG CTAACACACG AATAGCCCCG GAAGATTTAG AAACACTGCA ACGCAGTATC
GTTCTTTCTC ATGCAGCAGG CATCGGTGAG TTTATGTCAG ACGAAACGGT TCGTCTGATG
ATGGTATTGA AAATCAATAG TCTGTCTCGT GGTTTTTCTG GGATTCGCCT AAAAGTCATT
AATATGTTGA CCGACCTAGT TAACGCACAA GTTTACCCTT GTGTACCTAA AAAGGGCTCT
GTTGGCGCAT CAGGTGACTT AGCTCCTCTG GCCCACATGA GCACAGTATT ACTAGGTGAA
GGACAAGCTC GTCACAACGG TAATATCATT TCTGGGCAAG AAGCGTTAAA AATCGCAGGT
CTAGAACCCA TAACTCTGGC GCCGAAAGAA GGTTTAGCGC TGCTAAATGG TACCCAGGCA
TCAACAGCGT TCGCATTAGA AGGTCTGTTT ATCGCGGAAG ATCTTTTCGC TTCGGCTACA
GTATGTGGGG CAATGTCTGT CGAAGCCGCT CTCGGCAGCC GACGTCCATT CGATCCGCGC
ATTCATCGTG TACGTGGTCA TCGCAGCCAA ATGGACGCTG CACTGGCCTA TCGTCATCTA
TTGGATACAT CAAGTGACAT TGGTGATTCG CATACTAACT GTGAAAAAGT GCAAGACCCG
TATTCTTTGC GCTGTCAACC TCAAGTAATG GGGGCGTGTT TGCAGCAAAT CCGCAACGCC
GCCGAAGTAT TGCAAGTAGA AGCGAACTCC GTATCAGATA ACCCGTTGGT GTTTGCTGAA
GATGACGACA TCATCTCTGG CGGTAACTTC CACGCTGAGC CTGTTGCAAT GGCAGCTGAC
AACCTAGCAC TGGCGATTGC TGAGATCGGC AGCCTGTCTG AACGTCGTAT GGCATTGCTT
ATCGATAGCG CATTATCAAA ATTACCACCG TTCTTAGTTG ATAATGGTGG TGTGAACTCT
GGTTTCATGA TTGCCCAAGT CACCTCTGCT GCGCTAGCAA GCGAAAACAA AACGCTCGCT
CACCCAGCGT CAGTAGACAG CTTGCCAACA TCAGCAAACC AAGAAGATCA CGTGTCAATG
GCAACATTCG CGGCTCGCAG ACTGAAAGAA ATGGGCGAAA ACACTCGCGG TATTCTAGCG
GTCGAATACC TATCAGCAGC ACAAGGCCTA GACTTTAGAG CACCAAACAA GTCCTCTGAG
CGTATCGAGA TTGCCAAACA GATGTTGCGT GAAAAAGTAT CGTTCTACGA TAAAGATCGC
TACTTTGCGC CGGACATTGA ACAGGCCAAT ACTCTGCTTA AGCTGGCTAT TCACAACACG
CTCATGCCAG AGAGCCTGTT ACCAAGTGTT CAGTAA
 
Protein sequence
MLNLTLKPGH ISLNELRQVS RSPVNLTLDP EAIPAIEEST QVVDRVIAED RTVYGINTGF 
GLLANTRIAP EDLETLQRSI VLSHAAGIGE FMSDETVRLM MVLKINSLSR GFSGIRLKVI
NMLTDLVNAQ VYPCVPKKGS VGASGDLAPL AHMSTVLLGE GQARHNGNII SGQEALKIAG
LEPITLAPKE GLALLNGTQA STAFALEGLF IAEDLFASAT VCGAMSVEAA LGSRRPFDPR
IHRVRGHRSQ MDAALAYRHL LDTSSDIGDS HTNCEKVQDP YSLRCQPQVM GACLQQIRNA
AEVLQVEANS VSDNPLVFAE DDDIISGGNF HAEPVAMAAD NLALAIAEIG SLSERRMALL
IDSALSKLPP FLVDNGGVNS GFMIAQVTSA ALASENKTLA HPASVDSLPT SANQEDHVSM
ATFAARRLKE MGENTRGILA VEYLSAAQGL DFRAPNKSSE RIEIAKQMLR EKVSFYDKDR
YFAPDIEQAN TLLKLAIHNT LMPESLLPSV Q