Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003723 |
Symbol | |
ID | 8557458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2335551 |
End bp | 2337086 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646406820 |
Product | histidine ammonia-lyase |
Protein accession | YP_003286348 |
Protein GI | 262394494 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00913143 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAATT TAACGCTAAA GCCAGGTCAT ATTAGCTTAA ACGAACTACG CCAAGTGAGC CGTTCACCAG TCAACCTTAC TTTGGATCCT GAAGCCATTC CGGCCATTGA AGAAAGCACG CAAGTCGTGG ATCGTGTCAT CGCGGAAGAT CGAACGGTTT ACGGAATTAA CACTGGTTTT GGTCTATTGG CTAACACACG AATAGCCCCG GAAGATTTAG AAACACTGCA ACGCAGTATC GTTCTTTCTC ATGCAGCAGG CATCGGTGAG TTTATGTCAG ACGAAACGGT TCGTCTGATG ATGGTATTGA AAATCAATAG TCTGTCTCGT GGTTTTTCTG GGATTCGCCT AAAAGTCATT AATATGTTGA CCGACCTAGT TAACGCACAA GTTTACCCTT GTGTACCTAA AAAGGGCTCT GTTGGCGCAT CAGGTGACTT AGCTCCTCTG GCCCACATGA GCACAGTATT ACTAGGTGAA GGACAAGCTC GTCACAACGG TAATATCATT TCTGGGCAAG AAGCGTTAAA AATCGCAGGT CTAGAACCCA TAACTCTGGC GCCGAAAGAA GGTTTAGCGC TGCTAAATGG TACCCAGGCA TCAACAGCGT TCGCATTAGA AGGTCTGTTT ATCGCGGAAG ATCTTTTCGC TTCGGCTACA GTATGTGGGG CAATGTCTGT CGAAGCCGCT CTCGGCAGCC GACGTCCATT CGATCCGCGC ATTCATCGTG TACGTGGTCA TCGCAGCCAA ATGGACGCTG CACTGGCCTA TCGTCATCTA TTGGATACAT CAAGTGACAT TGGTGATTCG CATACTAACT GTGAAAAAGT GCAAGACCCG TATTCTTTGC GCTGTCAACC TCAAGTAATG GGGGCGTGTT TGCAGCAAAT CCGCAACGCC GCCGAAGTAT TGCAAGTAGA AGCGAACTCC GTATCAGATA ACCCGTTGGT GTTTGCTGAA GATGACGACA TCATCTCTGG CGGTAACTTC CACGCTGAGC CTGTTGCAAT GGCAGCTGAC AACCTAGCAC TGGCGATTGC TGAGATCGGC AGCCTGTCTG AACGTCGTAT GGCATTGCTT ATCGATAGCG CATTATCAAA ATTACCACCG TTCTTAGTTG ATAATGGTGG TGTGAACTCT GGTTTCATGA TTGCCCAAGT CACCTCTGCT GCGCTAGCAA GCGAAAACAA AACGCTCGCT CACCCAGCGT CAGTAGACAG CTTGCCAACA TCAGCAAACC AAGAAGATCA CGTGTCAATG GCAACATTCG CGGCTCGCAG ACTGAAAGAA ATGGGCGAAA ACACTCGCGG TATTCTAGCG GTCGAATACC TATCAGCAGC ACAAGGCCTA GACTTTAGAG CACCAAACAA GTCCTCTGAG CGTATCGAGA TTGCCAAACA GATGTTGCGT GAAAAAGTAT CGTTCTACGA TAAAGATCGC TACTTTGCGC CGGACATTGA ACAGGCCAAT ACTCTGCTTA AGCTGGCTAT TCACAACACG CTCATGCCAG AGAGCCTGTT ACCAAGTGTT CAGTAA
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Protein sequence | MLNLTLKPGH ISLNELRQVS RSPVNLTLDP EAIPAIEEST QVVDRVIAED RTVYGINTGF GLLANTRIAP EDLETLQRSI VLSHAAGIGE FMSDETVRLM MVLKINSLSR GFSGIRLKVI NMLTDLVNAQ VYPCVPKKGS VGASGDLAPL AHMSTVLLGE GQARHNGNII SGQEALKIAG LEPITLAPKE GLALLNGTQA STAFALEGLF IAEDLFASAT VCGAMSVEAA LGSRRPFDPR IHRVRGHRSQ MDAALAYRHL LDTSSDIGDS HTNCEKVQDP YSLRCQPQVM GACLQQIRNA AEVLQVEANS VSDNPLVFAE DDDIISGGNF HAEPVAMAAD NLALAIAEIG SLSERRMALL IDSALSKLPP FLVDNGGVNS GFMIAQVTSA ALASENKTLA HPASVDSLPT SANQEDHVSM ATFAARRLKE MGENTRGILA VEYLSAAQGL DFRAPNKSSE RIEIAKQMLR EKVSFYDKDR YFAPDIEQAN TLLKLAIHNT LMPESLLPSV Q
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