Gene VEA_003699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003699 
Symbol 
ID8557434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2307813 
End bp2308700 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content45% 
IMG OID646406796 
Productcytidine deaminase 
Protein accessionYP_003286324 
Protein GI262394470 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric
[TIGR01355] cytidine deaminase, homodimeric 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTC GCATTGAACA GGCGCTAGCA GGCGCTCCAG AAGCACTTTC CAAACAACTT 
GCTCCTATCA TCCAAGCTGA TGATTTTGAT GCTACGCTTT CAGTTCAACA GTTTGAGCAG
TTGCTTTCAG CTACCGGTCT ATCAGATAAA GAGCTTCGTG TTGCTCTACT TCCTTTTGCC
GCAGCATATT CCTATGCTCC TCTTTCTGAA TTTTATGTCG GTGCTATCGT TCGTGGTCTC
TCAGGTCGCC TTTACTTCGG TGCCAACATG GAATTCTTTG GTGTTCAGTT AGGTCAAACA
GTTCACGCTG AGCAGTCTGC AATTAGCCAC GCTTGGATGA AAGGTGAACG TGGTATTAAA
GATATCACTA TTAACTTCAG CCCATGTGGT CACTGCCGTC AGTTCATGAA CGAGTTATCT
ACCGCAAACG AGCTTAAAAT TCAGCTCCCA GAACGCGAAG AAAAGTCGCT GCATGAATAC
CTACCTGAAG CCTTTGGACC AAACGATCTC GGTATCGAAT CCGGCTTAAT GGCAGAAGTA
AAGCATCAGT TCTCATGCGA TGATGAAGAC ACTCTAATTC AAAGCGCTGT TGAAGCGATG
AACATGAGCC ACTCACCATA TACCAACAAC TTGAGTGGCT TAGCATTAGA AATGGCTAGC
GGCCGTGTAT TCCAAGGTGC TTATGCGGAA AATGCGGCGT TTAACCCTAG CTTGCCGCCA
TTACAAGTTG CGCTGATCCA AGTACTACTT GCGGGTGAAA CTTTTGACAA TATCAAAGCC
GCTGCTCTGG TAGAAAACTC AGAAGGCAAG ATCAGTCATT TGGCTGATAC GCAATCAACG
TTAGAAGCGT TGAATCCAGA TATTCCACTT AGTTTTGTCA ACGTATAA
 
Protein sequence
MKSRIEQALA GAPEALSKQL APIIQADDFD ATLSVQQFEQ LLSATGLSDK ELRVALLPFA 
AAYSYAPLSE FYVGAIVRGL SGRLYFGANM EFFGVQLGQT VHAEQSAISH AWMKGERGIK
DITINFSPCG HCRQFMNELS TANELKIQLP EREEKSLHEY LPEAFGPNDL GIESGLMAEV
KHQFSCDDED TLIQSAVEAM NMSHSPYTNN LSGLALEMAS GRVFQGAYAE NAAFNPSLPP
LQVALIQVLL AGETFDNIKA AALVENSEGK ISHLADTQST LEALNPDIPL SFVNV