Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003699 |
Symbol | |
ID | 8557434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2307813 |
End bp | 2308700 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406796 |
Product | cytidine deaminase |
Protein accession | YP_003286324 |
Protein GI | 262394470 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0295] Cytidine deaminase |
TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTC GCATTGAACA GGCGCTAGCA GGCGCTCCAG AAGCACTTTC CAAACAACTT GCTCCTATCA TCCAAGCTGA TGATTTTGAT GCTACGCTTT CAGTTCAACA GTTTGAGCAG TTGCTTTCAG CTACCGGTCT ATCAGATAAA GAGCTTCGTG TTGCTCTACT TCCTTTTGCC GCAGCATATT CCTATGCTCC TCTTTCTGAA TTTTATGTCG GTGCTATCGT TCGTGGTCTC TCAGGTCGCC TTTACTTCGG TGCCAACATG GAATTCTTTG GTGTTCAGTT AGGTCAAACA GTTCACGCTG AGCAGTCTGC AATTAGCCAC GCTTGGATGA AAGGTGAACG TGGTATTAAA GATATCACTA TTAACTTCAG CCCATGTGGT CACTGCCGTC AGTTCATGAA CGAGTTATCT ACCGCAAACG AGCTTAAAAT TCAGCTCCCA GAACGCGAAG AAAAGTCGCT GCATGAATAC CTACCTGAAG CCTTTGGACC AAACGATCTC GGTATCGAAT CCGGCTTAAT GGCAGAAGTA AAGCATCAGT TCTCATGCGA TGATGAAGAC ACTCTAATTC AAAGCGCTGT TGAAGCGATG AACATGAGCC ACTCACCATA TACCAACAAC TTGAGTGGCT TAGCATTAGA AATGGCTAGC GGCCGTGTAT TCCAAGGTGC TTATGCGGAA AATGCGGCGT TTAACCCTAG CTTGCCGCCA TTACAAGTTG CGCTGATCCA AGTACTACTT GCGGGTGAAA CTTTTGACAA TATCAAAGCC GCTGCTCTGG TAGAAAACTC AGAAGGCAAG ATCAGTCATT TGGCTGATAC GCAATCAACG TTAGAAGCGT TGAATCCAGA TATTCCACTT AGTTTTGTCA ACGTATAA
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Protein sequence | MKSRIEQALA GAPEALSKQL APIIQADDFD ATLSVQQFEQ LLSATGLSDK ELRVALLPFA AAYSYAPLSE FYVGAIVRGL SGRLYFGANM EFFGVQLGQT VHAEQSAISH AWMKGERGIK DITINFSPCG HCRQFMNELS TANELKIQLP EREEKSLHEY LPEAFGPNDL GIESGLMAEV KHQFSCDDED TLIQSAVEAM NMSHSPYTNN LSGLALEMAS GRVFQGAYAE NAAFNPSLPP LQVALIQVLL AGETFDNIKA AALVENSEGK ISHLADTQST LEALNPDIPL SFVNV
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