| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003698 |
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| Symbol | |
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| ID | 8557433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2306692 |
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| End bp | 2307369 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406795 |
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| Product | lrgA-associated membrane protein LrgB |
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| Protein accession | YP_003286323 |
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| Protein GI | 262394469 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGTTAG TTGTTACCAT TGCGGTTTTT CTTGTCGCGC GCCAAATCGC AATCAAAGTG
AATAATCCTC TAGCAAATCC TTTGCTGATC AGTATTGCAG TGCTCATTCC TTTGCTTACT
TACTTAAATG TACCGTTTGA AACGTATTAT GCGGATAACG AAGGGATCAG TTTTTTACTT
CAACCAGCTG TAGTTGCTCT GGCTTACCCG TTATATGAAC AACTACCACA AATTAAAGCA
AACTGGCGAA TCATCACTTT TGCTTGCACG GTAGGCAGTG TGATGTCTAT GATGACAACC
ACCTTGATCG CAGTCGCTTT CAAAGCGGAT ATCAGTTTAA TCGCAAGTCT AGTGGGTAAA
TCCGTCACTA CGCCAATAGC AATGGAAATT TCGAGTCACC TCGGTGGTGA AGCTGCCGTT
GCGGCGATCT TGGTTCTGAT TGTTGGTTTA TTGGGCGCGA TTTTGGCATA CCCAATTTAC
AACTTAATTG GAATTAAACA CCCGATTGCA CGTGGCCTAA CAATGGGTAC CGTGTCTCAT
GCCTTAGGCA CCGCGACATG TGCAGAGAAA CAGCCCATTG ATGCCGCGTT CTCATCACTC
GCATTGGTTT TATGCGGCAT CATCACTTCT ATTTTGGCTC CAAGCTTTTT TGCTTTGGCT
GTCTGGCTAT ATCAATAG
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| Protein sequence | MWLVVTIAVF LVARQIAIKV NNPLANPLLI SIAVLIPLLT YLNVPFETYY ADNEGISFLL
QPAVVALAYP LYEQLPQIKA NWRIITFACT VGSVMSMMTT TLIAVAFKAD ISLIASLVGK
SVTTPIAMEI SSHLGGEAAV AAILVLIVGL LGAILAYPIY NLIGIKHPIA RGLTMGTVSH
ALGTATCAEK QPIDAAFSSL ALVLCGIITS ILAPSFFALA VWLYQ
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