| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003671 |
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| Symbol | |
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| ID | 8557406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2279303 |
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| End bp | 2280376 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406768 |
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| Product | probable binding protein component of ABC transporter |
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| Protein accession | YP_003286296 |
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| Protein GI | 262394442 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGAA TGACCAAAGC ACCATTGGCG CTGTTGATTT CAGGAATGCT GTTGGGGACC
TCTGCTTATG CTGAAGACAA ATTGACGGTC GTATCTTGGG GTGGTGCATT CACCAAGAGC
CAAGTGGAGG CATATCACAA GCCTTTCATT AAAAAAACAG GTGTCGAGAT CGTATCCGAG
GATTTCAGCG GCGGATTAGC CGAAATTAAA GCGCAGGTGG AAGCGAACAA CGTGCGCTGG
GATTTGGTTT CTCTCGACAA GCCGGACATT GTTCGTGGTT GTGCAGAAGG GCTATTAGAA
CCAGTGAGCC CAAGTATTTT GCCTCCGGGC GCAGATGGAA CACCAGCACA AGAGGATTTC
ATTGATGGTG CGATTCACGA GTGCGCAATT AATACCATCG TTGTGTCCAC AGTATTAGCG
GTGAACGAAG ACGCGTTTAA AGGTAAGGTT TTGCCAAGCA AGTTGACCGA TCTTTTTGAC
CTAAAAACTT TTCCAGGTCG ACGTGCATTG CAAAAACAAC CTCAGGGCAA TCTTGAGTGG
GCACTATTGG CTGATGGTGT AAAGCCAGAA GAGGTCTACA GCCTGCTCGA AACCGAAGCG
GGGCGTGAGC GTGCTTTTGC TAAGTTGGAT ACGATCAAAT CAGAAGTGCT GTGGTGGACA
ACTGGTGCCC AGCCACCTCA AATGCTTGCT GACAAAGAAG TGGTGATCGC CTCGGCGTTT
AACGGCCGAA TTCACAATGC CCGTAAAGAT GAAGGTCAAC CATTTCGGAT TATATGGGAC
CGTCAAATGG GTTACATGAA TGGATGGGCG ATACCTAAAG GGAGCGAGAA CACAAAGCTT
GCATTGGACT TCATCGCTTT TTCTTCAGGA ACAAAACCAT TAGCTGATCA AGCTAAGTAC
GTTGCCTACG GGCCTACGCG TAAATCGTCT TCGGCGGAGG TGAACCCAGA CATTTTAGCG
AACCTTCCTA CCGCACCTCA AAACTTCCAA ACCGCCTTCC TGATTAACGA TGAATGGTGG
TCAGACTATG CGGATGAACT AAATGAAGAG TTCAATACCT GGCTGCTTAA CTAG
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| Protein sequence | MSRMTKAPLA LLISGMLLGT SAYAEDKLTV VSWGGAFTKS QVEAYHKPFI KKTGVEIVSE
DFSGGLAEIK AQVEANNVRW DLVSLDKPDI VRGCAEGLLE PVSPSILPPG ADGTPAQEDF
IDGAIHECAI NTIVVSTVLA VNEDAFKGKV LPSKLTDLFD LKTFPGRRAL QKQPQGNLEW
ALLADGVKPE EVYSLLETEA GRERAFAKLD TIKSEVLWWT TGAQPPQMLA DKEVVIASAF
NGRIHNARKD EGQPFRIIWD RQMGYMNGWA IPKGSENTKL ALDFIAFSSG TKPLADQAKY
VAYGPTRKSS SAEVNPDILA NLPTAPQNFQ TAFLINDEWW SDYADELNEE FNTWLLN
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