| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003669 |
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| Symbol | |
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| ID | 8557404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2277270 |
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| End bp | 2278184 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406766 |
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| Product | 1-pyrroline-4-hydroxy-2-carboxylate deaminase |
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| Protein accession | YP_003286294 |
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| Protein GI | 262394440 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTG ATTGGAAAGG TGTTTATCCG GCGGTCAGTA CGCAATTTCG TCAAGATCAG
TCAATCGACT TAGACGCAAC GCAAACCGTT ATAGATAACC AAATTAAAGA TGGTGTGAAT
GGCATTATCT GCTTGGGTAC CGTCGGTGAG AACTGCGCGT TGTTCCCGGA GGAGAAACGC
CAGGTCTTGC AAGCGGCAAA AGAAGTCGTA AATGGCCGTG TGCCTTTGAT TGCTGGTACA
GCAGAGTCTA TTACCACAGC AGCTGTTGAT TACATGCAGG ATGCGTACAA AATTGGTATC
GATGGTTGTA TGGTGATGCC TGCCATGGTT TACCGCACGT CTGAGAGCGA AACGTTCGAA
TATTACCGCA CGCTAGCAGA AGCAACGCCA GAAATGCCAA TCATGATTTA CAACAACCCG
GTTGCTTATG GTGTCGATGT AAACCTCGAT ATCATGGCGA AACTGGCTGA GTTTGAAAGC
ATTGTGGCTA TCAAAGAGTC GACCACTGAT ACTCGTCGTA TCACCGAGCT TTACAATAAA
TTTGATGACC GCTTTACCGT GTTCAGTGGT GTTGATGACA TCGCTCTTGA ATCATTGATG
CTAGGCGCGA CTGGCTGGAT TTCTGGTTTA ACCAACGCAT TCCCAGAAGA GTCCGTCGCG
ATTTATAAAC TGGCAAGCCA AGGTCGTTAT GCTGAAGCGT TAGAAATCTA CCGTTGGTTC
TTACCGCTAC TGCGTTTAGA CACCATTCCT ACGCTGGTTC AGTGCATTAA ACTGGCCGAG
CAAGTCTGCG GACGTGGATC TGAACAAGTT CGTGCGCCAC GCCAACTTTT ACAAGGTGAA
GAGCGTCAAC AAGTCATTCA AATGGTTGAA CATGCGTTAG AAACCCGCTT AGACCTATCC
AAATACAATC TGTAA
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| Protein sequence | MKIDWKGVYP AVSTQFRQDQ SIDLDATQTV IDNQIKDGVN GIICLGTVGE NCALFPEEKR
QVLQAAKEVV NGRVPLIAGT AESITTAAVD YMQDAYKIGI DGCMVMPAMV YRTSESETFE
YYRTLAEATP EMPIMIYNNP VAYGVDVNLD IMAKLAEFES IVAIKESTTD TRRITELYNK
FDDRFTVFSG VDDIALESLM LGATGWISGL TNAFPEESVA IYKLASQGRY AEALEIYRWF
LPLLRLDTIP TLVQCIKLAE QVCGRGSEQV RAPRQLLQGE ERQQVIQMVE HALETRLDLS
KYNL
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