| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003657 |
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| Symbol | |
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| ID | 8557392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2262050 |
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| End bp | 2263660 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406754 |
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| Product | oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA |
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| Protein accession | YP_003286282 |
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| Protein GI | 262394428 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAC CTAAGTTGCT TTTATTAGCG TCGATGATGA GTCCAATACT GGCAACACCA
AGCTATGCCG CGCCGCATCC CGCAGGTGTG ACCCTCGATG AGACACAAGA AATTACGCTA
AACAATGGGG CTGAAGTTAC TTCTATTGAC CCAGCCAAGC AAGCCGCAGA GCCCGCTTTT
AATCTCGGTC GAGACCTATT TGAAGGCCTG GTCATTCAAG ATAAGCAAGG TAAAACCATT
CCTGGTGTTG CTGAGTCTTG GTCAGTCAAT GACAACAATA CGGTTTATAC CTTCCACTTA
CGTGATGCAA AATGGTCAAA TGGCGAAACG GTCACTGCGC AAGATTTTGT CTACAGCTGG
CAACGCTTAC TGAATCCGAG CACTGCTTCA CCGTACGCTT GGTTTGCGGC CATTCCAAAT
ATCGCAAACT CACAAGCCAT TATGAAAGGC GAAGCAGAAC CCGAGTCTTT GGGCGTGAAG
GCGCTGGATG AAACAACGTT CCAGGTAACA CTCGAAGAGC CGATTCCCTT CTTTACGAAA
CTATTAAGTC ATCCAGTGCT TGCACCCGTT CATAAAGCGA CCGTTGAAAA ACATGGCAAC
CGTTGGACCC AGCCTGAGCA TATCGTTACA AATGGGGCGT TTACTGTCTC TGAATGGAAA
GTTAACGAAA AACTAGTGAT GGTTAAAAAC CCACATTATT GGGACGCAAG CAATGTAGTG
CTGGAAAAAG TCACCTGGCT ACCAATTGGT GATGCAAATG TAGTGCTAAA CCGCTACCTA
GCCGGTGAGA TAGACCAAGC GGTTTCCATT CCTGCCGCTC AGAAGAAAAA GCTAATTCAA
CAGCGCCCAC AAGAAGTGGC AAGCACCAGT GCGTCTCTTG GCTCCACATT CTATTACCTC
AACACTCAAC AAGGGCCAAC AAAAGACGTG CGGGTCCGTA AAGCCCTCTC ATATGCCATT
GACCGTCAAC TGTTAACGAG TGCTATCTTG AGAAACGGTG GGGTTCCAAT GTATACCCTT
GTGCCCCCTC AAACAGATGG TTTTAAATCT CACACTCCTG AGTTCGCAAC TTGGAACCGC
CATAAACGTA TCGAAAAAGC GCAGCAATTA CTGTCAGAAG CTGGATACGA TAAAAGCAAT
CCGCTTAAGT TAACGTTTAC CGTACCAACT TTCTCGATGG ACGTAAAAAT GGCAACAACC
ATGGCAGGCA TGTGGAAAAG CCGATTGGGT GCGCAAGTCA CGATAAAGCA GCTAGAACCG
AAAGTGTTCT ACGCACTTAA AGAGCCGACC GACATTACTC GCGGCGGCTG GACGGCCGAC
TACAATGAAG CCTCTACATG GTTGGATATC TTCGTTTCTA GTGGCGAGTA CAACGATTCT
CGTTATAACA ACCCGCAATA CGACGAGTTA ATGGCTCGTT CAAAGACCAT GAGCAATCCA
TCAGAACTGT ATCTACAAGC AGAAAGCATG CTGATTGAAG ACATGGCCAT TATTCCTATT
TATCGTCCGG GTAACGATCA ATACCTCATC AAGCCTTATG TGGGCGGCTA CGAACTGACA
AACCCTGAGT CTTCGTATTA CCGCAAGAAT GTCTATGTGA AAGCCCACTA A
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| Protein sequence | MKLPKLLLLA SMMSPILATP SYAAPHPAGV TLDETQEITL NNGAEVTSID PAKQAAEPAF
NLGRDLFEGL VIQDKQGKTI PGVAESWSVN DNNTVYTFHL RDAKWSNGET VTAQDFVYSW
QRLLNPSTAS PYAWFAAIPN IANSQAIMKG EAEPESLGVK ALDETTFQVT LEEPIPFFTK
LLSHPVLAPV HKATVEKHGN RWTQPEHIVT NGAFTVSEWK VNEKLVMVKN PHYWDASNVV
LEKVTWLPIG DANVVLNRYL AGEIDQAVSI PAAQKKKLIQ QRPQEVASTS ASLGSTFYYL
NTQQGPTKDV RVRKALSYAI DRQLLTSAIL RNGGVPMYTL VPPQTDGFKS HTPEFATWNR
HKRIEKAQQL LSEAGYDKSN PLKLTFTVPT FSMDVKMATT MAGMWKSRLG AQVTIKQLEP
KVFYALKEPT DITRGGWTAD YNEASTWLDI FVSSGEYNDS RYNNPQYDEL MARSKTMSNP
SELYLQAESM LIEDMAIIPI YRPGNDQYLI KPYVGGYELT NPESSYYRKN VYVKAH
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