| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003636 |
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| Symbol | |
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| ID | 8557369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2240545 |
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| End bp | 2242704 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646406731 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | YP_003286261 |
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| Protein GI | 262394407 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCACA AACTCTCACT CGAAACTAAA TACATTTGCT CGACCATTTT TGTTGTCCTG
TTTGTCGTAG TGATAAACCT CGCACTATAC ATGCATGGTT ACGATACGTA CTCAAATAAC
TTAACCCGCC AAATCACCGA GAACTCACAA GAAAAAACAG AGTCTTACGT CAAGCAAAAA
GGATTGGTTT ACGCAGAGTT ATTATCAAAA CAACTTTTTG ACCCACTCTA TACGGATAAT
ATCAGCCAAG CGTACGAGCA AATTAAAGCG ACATTAAGCC AACCAGATGT CTCGAAGATA
CACGTTGTTG ATAATGAAGG GCTAATCTTT CACGACGGTA CGACTCAGCT GAGTATGTTT
GCCCAGCCTC ATTACCGTTC TCGCTTTATT TTAAAAGCAA TAGAAGAGTC TAGAATTCTC
ATTTCTTTTT CTAAACATCA ATTAGAAATT GCTGCACCGA TTCAGCAATC GAATATCACA
CTGGGCGCGG TGTATCTTGA ACTCAACCTA GCACATCTAT TAGAAGAGAA AGAACAAAAC
ATTGCGCAAG TACAAGCGCT TACCTCAAAC GATAAGCAAA AGATGTTTAA CTTGCTGCTC
ACGATCAGTG CGATATCCGT TCTGCTCGGA AGTGCCATCG CGTATGCTTT GGGTCGCTCA
TTAATAAAAC CACTCAAACA ACTTAAAGAA CAATTTACAG AGTCAAATAC TCAAGCACTG
CCAATCACTG ATATAAAAAG TAAAGATGAA GTGGGTGATC TTATTTCGGC GTATAACAAA
ATGTCCAACA AAGTGAACCG ATACACAAGC CGGGTGGAGT TCATGGCGTA TCACGACATT
CTTACCTCCC TGCCTAACCG AGAAAAGTTG CTCATTGATA TCCAAAAGCA AATAACGAAC
CGCAAATCAC CCTCACTCGC GGTTGTTTTT ATTGATCTGG ATGACTTTAA ACATATTAAC
GATAACTACG GGCATAGCAT CGGAGATAAA TTGCTAGGTC ATCTCGCCTC AGAACTTCAA
GGTCGTTTGC CGAGTTACTT CCAGCCTCTT TACCGTCTTT CAACCATCGT AAGCCGAGTC
GGCGCTGACG AATTTGTGCT GGTCTTTCCA TGCAAAGACA GCCTCCACGC TAGAGAAAAA
GCGGACGATA TTCATCGCCA ATTGCTTTCT CCTTTTAACT TGGAAGAGAA CGATATTCAA
ATTACGGCAA GCCTTGGAGT CGCGGTGTAT CCGGAATTTG GCTCAAACGC AGAGTCTCTT
TTACAACTCT CCTCACTGGC GGCGCAAGAA TCTAAACGAC GCGGTAAAGA TATCATGACG
ATATACGATT CCGCGTTTGA TGAGACAGTG AAGCAGCGCT TATACATAGA AAAAGAACTG
CGCCGCTCAA TACGTGATTT GTCTCAGTTC GAGCTTTGGT ATCAACCCCA GTTCGACCTC
AACACCTACC AGTTGATTGG TGTTGAAGCA TTGGTTAGGT GGAATCATCC GGAGAAGGGT
TATATTAGCC CAGAATTATT TATCCCGATT GCAGAACAAA GTGACTTAAT TTTAGAGCTT
GGTGAATACC TCATCGAGAC AGCAATTAGC CAGCGAGCAC AATGGGCGGA TCATTTCGCT
GCTGATTTTC ATATCGCATT AAATTTGTCT CCTAGGCAGA TCTACCGCCA AGATTTAAGT
CAGCTCTTTT CGAAATATTT ACAACAATAT CAAGTCCCCC CTAAAACCAT TCATGTTGAA
GTGACAGAGT CTCTGTTTAT TGATGATATT GAGAAAGCGC AGTACGTGCT CAAAAAATTA
CAAGCTAACG GCGTAGAAGT GTGGCTAGAT GATTTTGGAA CTGGGTACTC TGCCCTCGCC
TACCTACAAC AAATGTCGTT TGATGGGCTT AAAATTGACC GTTCATTTAT TGCTCAAATC
CAAAAAAATG AACAAGATGA TTCATTAGTC CGTGCGATTA TATCCATGGC TCATAACCTA
AGAATGAGAG TGGTAGCTGA AGGCATAGAA ACCCAGACCC AACTAACAAG GATGGAATCA
CTTCACTGCG ACGTTGTTCA AGGCTTTTTC TTGGGTAGAC CGGTGCCGGC AGAAGAAATC
ATAGAGTTTG AGCAACAACG CCAAGCAATA GATGACTCAA CCGCCAGCAA CTATGCTTAA
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| Protein sequence | MFHKLSLETK YICSTIFVVL FVVVINLALY MHGYDTYSNN LTRQITENSQ EKTESYVKQK
GLVYAELLSK QLFDPLYTDN ISQAYEQIKA TLSQPDVSKI HVVDNEGLIF HDGTTQLSMF
AQPHYRSRFI LKAIEESRIL ISFSKHQLEI AAPIQQSNIT LGAVYLELNL AHLLEEKEQN
IAQVQALTSN DKQKMFNLLL TISAISVLLG SAIAYALGRS LIKPLKQLKE QFTESNTQAL
PITDIKSKDE VGDLISAYNK MSNKVNRYTS RVEFMAYHDI LTSLPNREKL LIDIQKQITN
RKSPSLAVVF IDLDDFKHIN DNYGHSIGDK LLGHLASELQ GRLPSYFQPL YRLSTIVSRV
GADEFVLVFP CKDSLHAREK ADDIHRQLLS PFNLEENDIQ ITASLGVAVY PEFGSNAESL
LQLSSLAAQE SKRRGKDIMT IYDSAFDETV KQRLYIEKEL RRSIRDLSQF ELWYQPQFDL
NTYQLIGVEA LVRWNHPEKG YISPELFIPI AEQSDLILEL GEYLIETAIS QRAQWADHFA
ADFHIALNLS PRQIYRQDLS QLFSKYLQQY QVPPKTIHVE VTESLFIDDI EKAQYVLKKL
QANGVEVWLD DFGTGYSALA YLQQMSFDGL KIDRSFIAQI QKNEQDDSLV RAIISMAHNL
RMRVVAEGIE TQTQLTRMES LHCDVVQGFF LGRPVPAEEI IEFEQQRQAI DDSTASNYA
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