| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003634 |
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| Symbol | |
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| ID | 8557367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2238621 |
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| End bp | 2239346 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646406729 |
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| Product | type IV pilus (Tfp) assembly protein PilF |
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| Protein accession | YP_003286259 |
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| Protein GI | 262394405 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA CAAAGCTCGG TGCACTACTA TTAATCTCTC AGTTTGCACT TGTGGGCTGC
GTGACGGTGA AAAAAGATGG TAGTCCTGTC GTTAAAGCCG ATCCTGTAGC AATGGCAGAA
TCACGTATCG CACTTGGCCT AGGTTATTTA GAAGGCGGCA ATATGATTCG CGCGCATGAT
AACTTGCAAC AAGCCTTAAC CCACGCACCT CAATACTATC GTGCTCAGTT ATCGATGGCT
CACTACTATG AAACGGTTGG CGAAGATGCT AAAGCCGAGC AAATGTATAA ACGCTCTCTA
CGCCAACACA CCAAAAACGG TAACGTGCTC AATAACTACG GCACCTTTCT TTGCAAGCGG
GGTGACTTCG AGAAAGCCGA TCAAATGTTT AATCGAGCCA TTGAGCAGCC TTATTACTAT
CTCATTCCGG CCAGTTATGA AAACGCCGCA TTTTGCGCGT TGAAGTCACA AGATAAAGAC
AAAGCGAAAT ACTACTTCGC CCGAGCTATT GATCATGACC CTCATAGGCC AAAATCTATT
TTGCAGCTAG CCAAGCTAGA AATTGATAGC GGCAATTACA CTGAAGCCAG AATTCGATTA
ATGAGATTTA ATCAAATGTA TGGCGTTAAG AAACCCTCTT TACAGCTCAT GATTCAACTT
GAACGTGCAG CAGGTAATGA AGCACTCGAG AAAAAATATC AAAAGCAATT GGAGATATTT
TCTTAA
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| Protein sequence | MKTTKLGALL LISQFALVGC VTVKKDGSPV VKADPVAMAE SRIALGLGYL EGGNMIRAHD
NLQQALTHAP QYYRAQLSMA HYYETVGEDA KAEQMYKRSL RQHTKNGNVL NNYGTFLCKR
GDFEKADQMF NRAIEQPYYY LIPASYENAA FCALKSQDKD KAKYYFARAI DHDPHRPKSI
LQLAKLEIDS GNYTEARIRL MRFNQMYGVK KPSLQLMIQL ERAAGNEALE KKYQKQLEIF
S
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