Gene VEA_003627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003627 
Symbol 
ID8557360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2230714 
End bp2231409 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content43% 
IMG OID646406722 
Productputative threonine efflux protein 
Protein accessionYP_003286252 
Protein GI262394398 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAATCT CGTGGATTGA CGGTATTGAT GACGGATTAA CAATTAATTA TCACGATAAT 
ATGGATATCT TGAATTTTGA GGCATTTATT ATTGCCATCA CTATTTTAAC GCTAACGCCG
GGTTTAGATA CGGCCCTTGT TATCCGTAAT ACCAGTCGCG CGGGTTTAAA AGACGGATGT
ACAACCAGTT TAGGGATTTG CTTTGGCTTA TTTGTGCATG CTTTCTTTTC AGCGGTTGGT
ATTTCGGCCA TTCTGGCGCA ATCTGCAGAG TTGTTCCAAA TCGTAAAAAT GATTGGTGCA
GCTTATCTTA TTTGGCTTGG TCTGAGCAGT TTAAAAGCCC TGATGTCGTC GAAGAATGGT
TTGTCAGTGA CTGAGCAGGT TCATGAAGTG TTTAATGGCA AACGCTCTTT TAGAGAGGGC
TTTCTTTCTA ACGTCTTGAA CCCAAAAACG GCAGTTTTTT ACTTGGCGTT CTTGCCACAG
TTTGTGAATC CAGAAGGTTC TCCTTTGCTT CAATCAATGA TGATGGCATC CGTGCACTTT
ATTATTGCGA TGGTTTGGCA GTGTGGTTTG GCTGGCGCAC TTAACTCAGC TAAGAGCCTG
TTAAAGAATG CAAGCTTTAT GAAGTGGATG GAAGGAGCGA CGGGCGCTGT CTTAGTCGCA
CTTGGCGTAA AGTTATTGAT TGAAAAGCCC GTGTAA
 
Protein sequence
MRISWIDGID DGLTINYHDN MDILNFEAFI IAITILTLTP GLDTALVIRN TSRAGLKDGC 
TTSLGICFGL FVHAFFSAVG ISAILAQSAE LFQIVKMIGA AYLIWLGLSS LKALMSSKNG
LSVTEQVHEV FNGKRSFREG FLSNVLNPKT AVFYLAFLPQ FVNPEGSPLL QSMMMASVHF
IIAMVWQCGL AGALNSAKSL LKNASFMKWM EGATGAVLVA LGVKLLIEKP V