Gene VEA_003618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003618 
Symbol 
ID8557351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2220886 
End bp2222313 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content43% 
IMG OID646406713 
Productsignal transduction histidine kinase 
Protein accessionYP_003286243 
Protein GI262394389 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGGGTA CATTCTTGAA AGATAAGAAG TCGTACTCGA TCAAACGTCA GTTAACTCTA 
TCAGTAGGCG TGTTGGTAAG TGTTCTCTTA CTCATCTCAC TTTATTTCAG TTTCCAATCT
GCGAAGCACG AGGTCGAAGA AGTTTATGAC GCTAGGCTTG GACAATCCGC AAAATTAATG
TTGCTGACGC TCTCAATTTC AACGGAAGAG AGGACTCTCG CTAACCATCG AGAATTATTT
AATGAGTGGA TGGAAAACAT TGAGTCAATG TCAAAGTCTG ACGACGACAA TGTCACAAAG
TTCGGCCACC CTTATGAACA AAACTTGGTT TTTCAATTCT ATCGAGACAA CACACTGCTC
TGGAGCTCTG ATCAAACCTT GCACGCGCTC TCTACGTCCT TTGATAATAA CGGCTACGCT
GATATCGTAA AAGACGCTAC ACAATGGCGT ACATTTCAGA TTTCACTGCC ACAAACAAAA
CATGATAATG AATACGTCGT GGTTGCAGAA AAATACAAGA TACGTAAAGA GATCATCCAC
GAAATTGCCC TATCCACATC AATAGAACAA TTGCTGATAC TACCAACTTT GTTGCTTTTG
CTGTTTTGGT TGATCGATAA ACATTTCCGA CCGATTAACG ACCTGCGCAC CGCCATCACA
CAAAGAAACG TACACCGATT AGATCGCATT CATGTAAAAG ACAACACCGT TGAACTCGCA
CCACTTGTCG ATTCGCTCAA CTCGCTCCTC TCTGAACTAG AGTTAGCCTG GCAAAGAGAG
AAACGCTTTA CACGTGCTGC AGCGCATGAA CTAAAAACCC CACTAACAAT CCTTCGTCTT
AACGTAGAAA ATGCACTTGA AAGTAATGAT CCGGAGCAAC TGAGAGGAGA TTTACACAAC
ATTCTGCAAG GCATTGAACG CACTGACCGC CTTATCCATC AGCTACTGAC TTTAGCTAAA
GTAGATAGCT TATCAGAACT TGTATTCGAC ACCGTTGAGC TAACCCCTTT GTTGCAAACC
GTTGTTGCTG ATTTGGCACC GTTAGCATTG AAGCATAAGC AAGACATCAG TTTATCATCT
TCCAACATCG CTATATCCGG TGATCGAATG TTGTTAGAGG TGTTATTTCG TAACCTCGTC
GATAATGCGA TTCGTTACTC CGGCGAGCAC AGTGACATAA AAGTCAGCGT CACAGAGAAC
AATAATACAA TCAAAGTCTT AATTTCCGAT ACTGGTCCAG AAATCCCGAA AGAAACTCGT
GAAAGAATCT TCGAACAGTT TTATCGGGGT CATTCCGAAC ATGGCGACGG TGCGGGTTTA
GGGATGTCAA TTTGCAAAGA CATTACAGCA CTACACCGTG CAACACTTGA GCTCATTCCC
AGAGAAAATA GTAGGAATAC GTTTGTCGTC ACTTTCCCAA AGTGCTAA
 
Protein sequence
MWGTFLKDKK SYSIKRQLTL SVGVLVSVLL LISLYFSFQS AKHEVEEVYD ARLGQSAKLM 
LLTLSISTEE RTLANHRELF NEWMENIESM SKSDDDNVTK FGHPYEQNLV FQFYRDNTLL
WSSDQTLHAL STSFDNNGYA DIVKDATQWR TFQISLPQTK HDNEYVVVAE KYKIRKEIIH
EIALSTSIEQ LLILPTLLLL LFWLIDKHFR PINDLRTAIT QRNVHRLDRI HVKDNTVELA
PLVDSLNSLL SELELAWQRE KRFTRAAAHE LKTPLTILRL NVENALESND PEQLRGDLHN
ILQGIERTDR LIHQLLTLAK VDSLSELVFD TVELTPLLQT VVADLAPLAL KHKQDISLSS
SNIAISGDRM LLEVLFRNLV DNAIRYSGEH SDIKVSVTEN NNTIKVLISD TGPEIPKETR
ERIFEQFYRG HSEHGDGAGL GMSICKDITA LHRATLELIP RENSRNTFVV TFPKC